| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2264 |
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| Symbol | cpxR |
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| ID | 5136491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2413678 |
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| End bp | 2414364 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533720 |
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| Product | transcriptional regulator CpxR |
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| Protein accession | YP_001218180 |
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| Protein GI | 147675245 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000005667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATA TCCTTTTGAT CGATGATGAC ACCGAATTGA CCAGTCTATT GACCGAGGTT
TTACAGTACG AAGGCTTTGA AATTTCACAA GCCAATGACG GTGAAGCCGG ACTAGCCGCG
GTCAGCGATG AGATCGACTT GATCCTACTC GATGTGATGA TGCCTAAGCT TAATGGCATG
GAAACCCTCA AGCGTCTGCG CGAAAAATGG GCAACGCCGG TTTTAATGCT GACCGCGAAA
GGCGAAGAGA TCGATCGGGT GATCGGCTTA GAGCTCGGAG CGGATGATTA TCTGCCCAAA
CCTTTTAGCG ATCGCGAGTT GCTGGCGCGC ATTCGTGCGA TTTTGCGCCG TACGCAAAAC
GGCCTCACGC CTAAAAACAG CGATGTCATC GAGTGTCAGG ACATTCAAGT CTACCCAGGA
AAACAGGAAG CCTACTGCCA AGGACAACTG CTGGAACTGA CGACTACGGA ATTTGCCCTG
CTCACTCACT TTGTGCAGTC GCCCGGAGCA ACCTTGACCA AAGAGATGCT GAGTATTGAA
GTGCTCGGCA AGCACCTTGC GGCATTTGAT CGAGCCATCG ATATGCATGT GTCTAACCTG
CGCAAAAAAC TGCCTGAGCG GCCAGATGGC AAAGCACGGA TCAAAACCTT GCGCGGTCGC
GGCTACTTAA TGGTTCAGGA GGAGTAA
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| Protein sequence | MAHILLIDDD TELTSLLTEV LQYEGFEISQ ANDGEAGLAA VSDEIDLILL DVMMPKLNGM
ETLKRLREKW ATPVLMLTAK GEEIDRVIGL ELGADDYLPK PFSDRELLAR IRAILRRTQN
GLTPKNSDVI ECQDIQVYPG KQEAYCQGQL LELTTTEFAL LTHFVQSPGA TLTKEMLSIE
VLGKHLAAFD RAIDMHVSNL RKKLPERPDG KARIKTLRGR GYLMVQEE
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