| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2258 |
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| Symbol | metF |
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| ID | 5136762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2408032 |
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| End bp | 2408946 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533714 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001218174 |
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| Protein GI | 147673318 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0561235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACTCG GTCACAGGGA GTACAAGATG GGATACACAC ACGCTAGCCA TATCGATGCA
TTGAACCAAA ACATTGCGGA GCTTTCCGAC ATCAATGTTT CGTTTGAGTT TTTTCCACCC
AGCTCACCAC AAATGGAAGA AACGCTTTGG GGATCGGTAC ACCGTCTGAA AACACTCCAA
CCGAAATTTG TTTCGGTCAC TTATGGTGCA AACTCTGGTG AGCGTGACCG TACTCACTCG
ATCATTAAAG CGATCAAAGA TCAAACCGGT TTAATTGCCG CGCCACACCT GACTTGTATC
GATGCCACTC GTGATGAACT GATCCAGATC GCCGATGACT ACTGGCATAA CGGCATCCAG
AATATTGTGG CGCTGCGTGG GGATATCCCG GCTGGCGGTG GTAAGCCAGA GATGTACGCC
TCCGATCTAG TGACGCTGCT CAAATCACGC CACGATTTTG ATATTTCCGT GGCCGCCTTC
CCTGAAGTGC ACCCTGAAGC CAAAAGCGCG CAAGCGGACC TGCTCAATTT AAAACGTAAA
GTCGATGCAG GTGCGAATCG TGCCATCACG CAGTTTTTCT TTGATGTAGA AAGCTACCTG
CGTTTTCGCG ATCGCTGTGT GGCCGCTGGG ATTGACGTAG AAATCGTGCC TGGCATTCTG
CCGGTTTCTA ACTTTAAACA AGCGTCGCGC TTCGCTGCGC AAAACAACGT CAAAGTTCCG
AATTGGATGG TGAAGCAGTT TGAAGGATTA GAAGACGATC CAGTGACTCG CCAGTTGGTA
GGTGCAAGCC AAGCCATTGA TATGGTGCGC GTGCTGTGCC GTGAAGGGGT GAAGGATTTC
CACTTCTACA CCCTAAATCG TGCCGAAATG ACTTACGCGT TATGCCACAC CTTAGGCGTT
CGCCCACAAG CTTAA
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| Protein sequence | MTLGHREYKM GYTHASHIDA LNQNIAELSD INVSFEFFPP SSPQMEETLW GSVHRLKTLQ
PKFVSVTYGA NSGERDRTHS IIKAIKDQTG LIAAPHLTCI DATRDELIQI ADDYWHNGIQ
NIVALRGDIP AGGGKPEMYA SDLVTLLKSR HDFDISVAAF PEVHPEAKSA QADLLNLKRK
VDAGANRAIT QFFFDVESYL RFRDRCVAAG IDVEIVPGIL PVSNFKQASR FAAQNNVKVP
NWMVKQFEGL EDDPVTRQLV GASQAIDMVR VLCREGVKDF HFYTLNRAEM TYALCHTLGV
RPQA
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