| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2254 |
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| Symbol | |
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| ID | 5135711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2402209 |
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| End bp | 2403486 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533710 |
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| Product | putative malate dehydrogenase |
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| Protein accession | YP_001218170 |
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| Protein GI | 147675732 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.966162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATG ACAATCGCCT CAACCCAACA CCTGAAGAAC AATTTCGCCA ACGCGCTCTG
GATTACCATG CTTACCCAAC CGCGGGCAAA ATTGGTATTG CACTGACCAA GCCAGCCGAT
TCTGCTGCCG ATCTCGCTCT GGCTTATAGC CCAGGTGTAG CTGAGCCAGT GCGTGAAATC
GCGCAAAACG TTGACAATGT GTATAAGTAC ACCGCGAAAG GCAACACGGT GGCCGTGATC
TCTAACGGCA CCGCAATTTT AGGATTGGGA AATTTAGGCC CGATGGCCTC TAAGCCTGTC
ATGGAAGGTA AGGCACTGCT GTTTAAACGC TTCGCAGGAT TGGATTCGAT TGATATTGAA
GTAAAACACC GCACGATCGA CGAATTTATC GATACTGTCG CTAACATTGC TGATACTTTC
GGCGGTATCA ACTTAGAAGA TATCAAAGCC CCAGACTGCT TTGAAATTGA GCGCCGCCTG
ATTGAGCGTT GTGATGTCCC TGTATTCCAC GATGACCAAC ACGGTACTGC GATTGTCACC
GCGGCTGGTA TGCTTAATGC GCTTGAGTTG CAAGGTAAAC AACTGAAAGA CTGTATTATC
GTCTGCCTTG GTGCGGGTGC CGCAGCAGTG GCGTGTATGG AGCTACTGAT CAAATGCGGG
GCAATGCGTG AGAAAATCTA CATGCTGGAT CGCAAAGGCG TGATCCACAC TCGCCGTGAT
GATCTCAATG AATACAAAGC ACTGTTTGCC AACAACACCG ACAAGCGTAC GTTGGAAGAT
GTGATTGCGG GAGCGGATCT GTTCCTCGGC GTTTCTGGCC CTAACTTGCT GCCAGCGGAT
GCCCTTAAGC TGATGGCCGA CAAGCCTGTG GTGTTTGCCT GCTCCAACCC AGATCCTGAA
ATCAAGCCAG AAATTGCTCA TCAAGTGCGT AACGACATGA TCATGGGGAC TGGTCGCAGC
GACTATCCAA ACCAAGTTAA CAACGTGCTC TGTTTCCCGT TCATTTTCCG TGGAGCACTC
GATGTGCGCG CGAGTGAAAT CAATGACCAG ATGAAACTGG CTGCAGTAGA GGCGATTCGC
CAACTGGCGA AAGAGCCTGT GCCAGCCGAA GTGCTGGCAG CTGCTGGAGT GGATAAGCTC
AGTTTCGGTA TTGATTACAT CATTCCAAAA CCGATGGACC CTCGCCTATT GCCACGCGTA
GCACGCGCCG TCGCGGAAGC GGCAGTGGAA TCAGGTGTTG CTCGTATCCC AATGCCAGAA
AACTACATGC AGGCTTAA
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| Protein sequence | MSDDNRLNPT PEEQFRQRAL DYHAYPTAGK IGIALTKPAD SAADLALAYS PGVAEPVREI
AQNVDNVYKY TAKGNTVAVI SNGTAILGLG NLGPMASKPV MEGKALLFKR FAGLDSIDIE
VKHRTIDEFI DTVANIADTF GGINLEDIKA PDCFEIERRL IERCDVPVFH DDQHGTAIVT
AAGMLNALEL QGKQLKDCII VCLGAGAAAV ACMELLIKCG AMREKIYMLD RKGVIHTRRD
DLNEYKALFA NNTDKRTLED VIAGADLFLG VSGPNLLPAD ALKLMADKPV VFACSNPDPE
IKPEIAHQVR NDMIMGTGRS DYPNQVNNVL CFPFIFRGAL DVRASEINDQ MKLAAVEAIR
QLAKEPVPAE VLAAAGVDKL SFGIDYIIPK PMDPRLLPRV ARAVAEAAVE SGVARIPMPE
NYMQA
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