| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2251 |
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| Symbol | priA |
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| ID | 5137672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2399224 |
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| End bp | 2401428 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533707 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001218167 |
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| Protein GI | 147674045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.889331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCCT CCATTGCCCG AGTTTGCCTA CCTGTACCTC TGGATAAGTC TTTCGACTAT
CTGATCCCAG CTCATCTATT TCCAGTGCTG GGCGGTCGTG TGCAAGTGCC TTTTGGGCGA
CAAACCTTGG TCGGTATTGT CCAGTCGCTG ACACATCAAT CCGATTTTCC TATCGAACAA
CTGAAATCCG TGCAAGCCGT TTTGGATGAC GCGCCCGTGT GGCCAGATAA ACTGCAGTCT
CTGCTGCACT GGTGTAGCCA GTTTTATCAT TATCCGCTCG GTGAAACGTA CGCGAATGCC
TTGCCCGGCG CACTGCGCAA AGGCAAAGCG GCAGAGCTGA CTAGCCATAA AGAGTGGCGT
TTGACCGCGC TTGGTCAAGA GCAACTGATG CAAGGGGTGA AGCGTGGCGC GGTAAAACAA
GCGCAAGTTC TCCATTTGTT GCAGCACGGC GCTTTATCGC ACCAAACTTT GCTTGATGAA
GAGGTGAGCA GCACGACCCT CAAAGCCTTG GTCGAAAAAG GGTGGATTGA GTGTGAAGAG
CGTAAACCTG TGGCGCGTCC TTGGCCGCAA GAGCTGGAAG CTAAAGTCGA TAAACCTAGG
CTTAATCAAG AGCAGGCGAT CGCGATTGCG GCGGTGAATA GCCAGCAAGG TTTCGGCTGC
TTTTTATTAG AAGGGGTAAC GGGCTCAGGC AAAACAGAGG TGTATCTTAA CCTCATCACA
CCGGTATTGG CGCGTGGTGA ACAAGCCTTG GTGTTGGTGC CGGAAATTGG TTTAACCCCA
CAAACCATCA ACCGGTTTCG CCAACGTTTT AATGTCCCCG TCGAAGTCAT GCACTCGGCG
CTCAACGATA CTGAACGCCT CAACGCTTGG CTGGCGGCGC GCGATAAAGT GGCGGGGATT
GTGATTGGTA CGCGCTCGGC GCTGCTCACA CCCTTTGCCA AATTGGGCAT TATTATTGTT
GATGAAGAAC ATGATAGTTC TTACAAGCAG CAAGATAGCC TGCGTTATCA CGCCCGCGAT
GTGGCTGTGA TGCGCGCGCA TCTGGAGAAT ATTCCGATTG TGCTTGGCTC GGCGACGCCA
GCCTTGGAAA CGTTGCATAA TGCGCTCAGT GGTAAATACC ATCACTTGCA ACTGACGCAG
CGTGCTGGTA ATGCACTACC CACACGTAAC CACGCGTTGG ATGTGAAAGG GCTCTATCTG
GAAAGTGGTC TGTCTGCGCC TTTGATTGCG GAAATGCGCC GCCATTTGTC GGCGGGCAAT
CAGGTGATGC TGTTTTTAAA CCGCCGCGGT TTTTCTCCGG CCTTGATGTG CCATGAATGC
GGCTGGATTG CGGAGTGCCA GCGCTGTGAT GCCTATTACA CCTACCATCA ACACAGCAAT
GAGATGCGCT GCCACCATTG TGGTTCACAG CGTCCTGTTC TCCATCAATG CAAAGGGTGC
GGCTCGACTC AACTGGTTAC TGTCGGCGTT GGTACGGAAC AGCTTGAAGC GCAATTACAC
ACTCTATTCC CTGAGTATCG TTCAGTGCGG ATTGATCGAG ATAGCACGCG GCGTAAAGGC
AGTTTGGAAT CGGCGTTAAC CGCGATTCGC AAAGGCGAAT ATCAGATTTT GATTGGTACG
CAAATGCTCG CCAAAGGACA TCACTTCCCC GATGTTACCT TGGTCGCGTT GTTGGATGTC
GATGGCTCAT TGTACAGCAG TGATTTTCGC GCTTCTGAGC GTTTGGCTCA GCTCTTTATT
CAAGTCGCAG GGCGGGCAGG GCGTGCCAGC AAGCCGGGCG AAGTGGTGCT ACAAACGCAT
CATCCCGAAC ACAGTTTGCT ACAAGCCTTG CTGCATAAGG ATTACCACCA TTTTGCCCTG
ACGGCGTTGG AAGAGCGTAA GCTGGCGCAG TTGCCCCCTT ATTCTTTCTT GAGCTTATTT
CGAGCTGAAG CCAATCACAC CGCTCAAGTG GAAGATTTTT TGCGTCAAGT GCGCGAAACC
TTGCGCTGCA ATCCTTGGTT TGATAGCGAA TGTATGGTGC TCGGGCCAAC GCCTGCGCCA
CTCGCGAAAC GAGCGGGAAA ATTCCGTTGG CAGCTTTTAC TACAAACGCC GAATCGCACC
CTGATGCAGA AGATTTTGCA AAGCGCACGT CCAGCACTGC AACAATTACC GCTGGCGAGC
AAGGTGCGCT GGTCGATCGA TATTGATCCG CAAGATTTGA GCTAA
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| Protein sequence | MRPSIARVCL PVPLDKSFDY LIPAHLFPVL GGRVQVPFGR QTLVGIVQSL THQSDFPIEQ
LKSVQAVLDD APVWPDKLQS LLHWCSQFYH YPLGETYANA LPGALRKGKA AELTSHKEWR
LTALGQEQLM QGVKRGAVKQ AQVLHLLQHG ALSHQTLLDE EVSSTTLKAL VEKGWIECEE
RKPVARPWPQ ELEAKVDKPR LNQEQAIAIA AVNSQQGFGC FLLEGVTGSG KTEVYLNLIT
PVLARGEQAL VLVPEIGLTP QTINRFRQRF NVPVEVMHSA LNDTERLNAW LAARDKVAGI
VIGTRSALLT PFAKLGIIIV DEEHDSSYKQ QDSLRYHARD VAVMRAHLEN IPIVLGSATP
ALETLHNALS GKYHHLQLTQ RAGNALPTRN HALDVKGLYL ESGLSAPLIA EMRRHLSAGN
QVMLFLNRRG FSPALMCHEC GWIAECQRCD AYYTYHQHSN EMRCHHCGSQ RPVLHQCKGC
GSTQLVTVGV GTEQLEAQLH TLFPEYRSVR IDRDSTRRKG SLESALTAIR KGEYQILIGT
QMLAKGHHFP DVTLVALLDV DGSLYSSDFR ASERLAQLFI QVAGRAGRAS KPGEVVLQTH
HPEHSLLQAL LHKDYHHFAL TALEERKLAQ LPPYSFLSLF RAEANHTAQV EDFLRQVRET
LRCNPWFDSE CMVLGPTPAP LAKRAGKFRW QLLLQTPNRT LMQKILQSAR PALQQLPLAS
KVRWSIDIDP QDLS
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