| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2247 |
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| Symbol | hslU |
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| ID | 5135913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2395097 |
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| End bp | 2396428 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533703 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001218163 |
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| Protein GI | 147673421 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACTCCCCG CGAAATAGTG AGCGAGCTCA ATCGCCACAT CATAGGTCAA
GATAAAGCCA AACGTGCCGT AGCGATTGCA CTGCGTAACC GTTGGCGTCG TATGCAGCTT
GAAGAGAGCT TGCGTGTTGA AGTGACCCCG AAAAATATTC TGATGATTGG CCCAACCGGT
GTCGGCAAAA CTGAAATTGC TCGCCGTTTA GCCAAGCTTG CGAACGCGCC TTTCATCAAG
GTTGAAGCGA CCAAATTCAC CGAAGTGGGC TATGTCGGTA AGGAAGTGGA ATCGATCATC
CGCGATCTGA CTGATGTTGC GGTGAAGCTG ACGCATCAGC AAGCGATGGA GAAAGTAAAA
TTCCGCGCTG AAGAGTTAGC GGAAGAGCGC GTATTGGATG CGCTGCTGCC TCCACCACGC
GATGCGTGGG GACAAGCAGA GCAAAAAGAG GAGAACTCCA GCACCCGCCA AGTATTTCGT
AAAAAGTTGC GTGAAGGGCA ACTGAACGAC AAAGAGATTG AAATTAACGT CGCTGTACCG
CAGATGGGCG TGGAAATCAT GGCACCTCCA GGCATGGAAG AGATGACCAA CCAACTGCAG
GGACTGTTCC AAAACCTCGC GGGCGACACC AAGAAAAAGC GCAAAATGAA GATTAAAGAT
GCGCTGAAAG CCTTGGTGGA AGAAGAAGCC GCTAAGCTAG TCAATCAAGA AGAGCTGAAA
GAGCAGGCGA TTTACAATGT CGAAAATAAC GGCATCGTGT TTATCGATGA AATCGACAAA
ATCTGTAAGC GTGGAGAAGT CTCGGGTCCC GATGTTTCTC GTGAAGGGGT GCAGCGCGAT
CTGCTGCCTT TGATTGAAGG CAGTACGGTA TCCACCAAGC ATGGCATGGT GCGAACGGAT
CACATCCTGT TTATTGCCTC AGGCGCGTTC CAAGTAGCAA AACCGTCAGA TTTGATCCCA
GAGCTGCAAG GCCGTTTGCC CATCCGTGTT GAGTTGGAAG CCCTGTCGAG CAACGACTTC
AAACGCATTC TGACTGAGCC GAAAGCATCA CTCACCGAGC AATATGTTGC GCTGATGAAA
ACCGAACAGG TGGATGTGCA GTTTACCGAA GATGGTATCA AGCAGATTGC GGATGCGGCA
TGGCAAGTTA ACGAAACCAC CGAAAATATT GGTGCGCGAC GTCTGCATAC TGTGCTGGAG
CGTTTAATGG ATGAAATCTC CTTTGATGCA ACAGAAAAAG CCGGCCAAGC CTTCGTGATC
GATGCTGCTT ACGTGAAAGC GCGTTTGGGT GAGCTGGTCG AAGACGAAGA TCTCAGCCGT
TTCATTCTCT AG
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| Protein sequence | MSEMTPREIV SELNRHIIGQ DKAKRAVAIA LRNRWRRMQL EESLRVEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVESII RDLTDVAVKL THQQAMEKVK
FRAEELAEER VLDALLPPPR DAWGQAEQKE ENSSTRQVFR KKLREGQLND KEIEINVAVP
QMGVEIMAPP GMEEMTNQLQ GLFQNLAGDT KKKRKMKIKD ALKALVEEEA AKLVNQEELK
EQAIYNVENN GIVFIDEIDK ICKRGEVSGP DVSREGVQRD LLPLIEGSTV STKHGMVRTD
HILFIASGAF QVAKPSDLIP ELQGRLPIRV ELEALSSNDF KRILTEPKAS LTEQYVALMK
TEQVDVQFTE DGIKQIADAA WQVNETTENI GARRLHTVLE RLMDEISFDA TEKAGQAFVI
DAAYVKARLG ELVEDEDLSR FIL
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