| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2244 |
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| Symbol | |
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| ID | 5137183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2392017 |
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| End bp | 2393399 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533700 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218160 |
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| Protein GI | 147674936 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGGCA CCTTGTTTTC CTTCGTTGCC CAGCTTATGC ACGATAAACA CGGCCTGCTT
TCTGCCCCCA TCCCCCTCGT TTTACGGCAA ATGACCGTAC CGATGATTTT CGGTTTGGTG
GCCATTTTGA TGTTCAACCT TGTCGATACT TTCTTTATTT CCTTACTAGG TACACAGGCG
CTGGCGGCAA TCAGTTATAC CTTTCCGGTC ACCTTTGCGG TCAACTGTAT TACCATGGGC
ATTGGGGTTG GGTTATCCAC TTGCATAGGG CGCTTGCTCG GACAAGGTGA TGGACGACAA
GCCGCGCGCG TGTCTAGTCA TGGGTTACTG CTCGCCTTAT TGCTAGTGGC CGCAGCTTCA
ACACTCGGTT TATTGACCAT AGAACCGCTG TTTTTGCTGC TTGGTGCCAG CCATGAGCTG
ATCCCTCTTA TCAAAGAGTA CATGGTGGTG TGGTACCTCA CGATTCCCCT GCTCGTGCTA
CCTATGGCCG GTAACAGCGC GATTCGCGCC ACTGGCGATA CCAAAACACC CGCCAAAATT
ATGATGCTGG CGGGGCTGAT TAACGGCGCG CTCGACCCAC TGCTGATTTT TGGCTACGGC
CCATTTCCTG AACTCGGCAT CCAAGGTGCT GCGATTGCTA GCGCTTTCTC TTGGTTGGGG
GCATTAATCG GCTCACTCTA TTTGCTGATC AAGCGTGAAA AACTGCTCGC CATACCATCG
CTGCCTCATC TGCGCGATGA CTGGCAACAG ATTTTAAAAA TCGGCACTCC GGCTGCGCTT
TCTACCGCAA TGAACCCAAT TTCTGGCGCA CTGCTGATGA TCATGCTCTC AAGCCACGGC
ACTGCAGCGG TGGCCGCGTA TGGTGCGGCG CAGCGCATTG AGTCGATTCT GATTTTGGTA
CTGATGTCGC TCACGTCTGC CCTCACCCCC TTTATGGCGC AAAATCTTGG GGCGCAAAAT
CCTGCACGCA GCTTTGCCGG ACTCTTTCTG AGTCTACGCT TTTCTCTGCT GTTTCAACTT
ATGGTGTTTA TCATGATGGT ACCGCTGAGT ATTCCACTGG CGGCGCTGTT TTCTCAAGAG
CAAGCCGTGC GCGATCTGCT GTGGCACTAT TTGTTAGTCG TGCCGGTCAG CTACGGCTTC
CAAGGCGTGG TGATGATGTT GGTTTCCGCC CTCAACGCCT TACATCAACC ACTCAAGGCT
TTTCAATGGA GCTTTATGCG CCTGTTTGTG TTCACCCTAC CCGCAGCTTG GATTGGCGGC
AGACTGTACA ACATTGAAGG GTTATTTATC GGTATTGCGG TGGGGAACAT ACTGGGCGGA
TTATTGGGTT ATCTCTATGC GCTCAGATTG CGGCGTCAAA CCCTTACGCC TGATTTGGAT
TAA
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| Protein sequence | MLGTLFSFVA QLMHDKHGLL SAPIPLVLRQ MTVPMIFGLV AILMFNLVDT FFISLLGTQA
LAAISYTFPV TFAVNCITMG IGVGLSTCIG RLLGQGDGRQ AARVSSHGLL LALLLVAAAS
TLGLLTIEPL FLLLGASHEL IPLIKEYMVV WYLTIPLLVL PMAGNSAIRA TGDTKTPAKI
MMLAGLINGA LDPLLIFGYG PFPELGIQGA AIASAFSWLG ALIGSLYLLI KREKLLAIPS
LPHLRDDWQQ ILKIGTPAAL STAMNPISGA LLMIMLSSHG TAAVAAYGAA QRIESILILV
LMSLTSALTP FMAQNLGAQN PARSFAGLFL SLRFSLLFQL MVFIMMVPLS IPLAALFSQE
QAVRDLLWHY LLVVPVSYGF QGVVMMLVSA LNALHQPLKA FQWSFMRLFV FTLPAAWIGG
RLYNIEGLFI GIAVGNILGG LLGYLYALRL RRQTLTPDLD
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