| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2237 |
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| Symbol | groEL |
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| ID | 5136742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2386492 |
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| End bp | 2388126 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533693 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001218153 |
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| Protein GI | 147675528 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA AAGACGTACG TTTTGGTAAT GACGCTCGTG TAAAAATGCT AGAAGGCGTA
AACATTCTGG CCGATGCGGT AAAAGTGACC TTAGGTCCTA AAGGCCGTAA CGTAGTTCTC
GACAAATCTT TCGGTGCACC AACCATTACC AAAGATGGTG TATCAGTTGC GCGTGAAATT
GAACTGGAAG ACAAATTCCA GAACATGGGC GCACAAATGG TCAAAGAAGT CGCTTCTCAA
GCCAACGACG CGGCGGGTGA CGGTACAACC ACAGCCACCG TACTGGCTCA AGCGATTGTG
AACGAAGGCC TAAAAGCGGT CGCGGCGGGC ATGAACCCAA TGGATCTGAA GCGCGGGATC
GATAAAGCGG TTATCGCTGC GGTAGAAGAG TTGAAAGCAC TGTCTGTACC TTGTGCCGAT
ACTAAAGCGA TTGCCCAAGT AGGTACCATC TCTGCTAACT CAGACTCTAG CGTGGGCAAC
ATCATTGCTG AAGCGATGGA AAAAGTGGGT CGCGATGGCG TGATCACCGT TGAAGAAGGC
CAAGCGCTGC AAGACGAGCT GGATGTGGTT GAAGGTATGC AGTTTGACCG TGGCTACCTG
TCACCGTACT TCATCAACAA CCAAGAATCA GGCAGTGTAG AACTGGATAA CCCATTCATC
CTGCTGGTGG ATAAGAAAAT CTCTAACATC CGCGAACTGC TGCCAGTACT GGAAGGCGTA
GCGAAAGCCT CTCGTCCACT GCTGATCGTG GCTGAAGATG TGGAAGGCGA AGCGCTGGCG
ACTCTGGTTG TCAACAACAT GCGCGGCATC GTGAAAGTGG CAGCGGTTAA AGCTCCTGGC
TTTGGCGATC GTCGTAAAGC GATGCTGCAA GATATCGCGA TCTTGACTGG CGGTGTTGTG
ATCTCTGAAG AGATCGGTCT GGAGCTGGAA AAAGCGACTC TGGAAGACCT AGGCCAAGCG
AAACGCGTTT CTATCACCAA AGAAAACTCA ACCATCATCG ATGGTGCTGG CGATCAAGCC
GCGATCCAAG GTCGTGTTGC GCAGATCCGT CAACAAATCG AAGAAGCCAC TTCTGACTAC
GACAAAGAGA AACTGCAAGA GCGCGTAGCA AAACTGGCTG GCGGCGTTGC AGTAATCAAA
GTGGGCGCAG CAACCGAAGT GGAAATGAAA GAGAAGAAAG ATCGCGTAGA AGACGCGCTG
CACGCGACTC GCGCAGCGGT AGAAGAAGGC GTTGTTGCGG GTGGTGGTGT AGCCCTGATC
CGCGCAGCTT CTAAACTCTC TTCTCTGGTG GGTGACAACG AAGAGCAAAA CGTGGGTATC
CGTGTCGCAC TACGTGCGAT GGAAGCGCCA CTGCGTCAAA TCGTGAAAAA CGCGGGTGAC
GAAGAATCAG TGGTTGCCAA CAATGTGCGT GCAGGCGAAG GTAACTACGG TTACAACGCG
GCAACGGGCG TGTACGATGA CATGATCGAA ATGGGTATTT TGGATCCAAC CAAAGTAACC
CGTTCTGCTC TGCAATTCGC AGCGTCTGTT GCGGGTCTGA TGATCACCAC TGAAGCGATG
ATCACTGAGC TGCCGAAGAA AGATGCACCA GCAATGCCAG ACATGGGCAT GGGTGGCATG
GGCGGCATGA TGTAA
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| Protein sequence | MAAKDVRFGN DARVKMLEGV NILADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI
ELEDKFQNMG AQMVKEVASQ ANDAAGDGTT TATVLAQAIV NEGLKAVAAG MNPMDLKRGI
DKAVIAAVEE LKALSVPCAD TKAIAQVGTI SANSDSSVGN IIAEAMEKVG RDGVITVEEG
QALQDELDVV EGMQFDRGYL SPYFINNQES GSVELDNPFI LLVDKKISNI RELLPVLEGV
AKASRPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAILTGGVV
ISEEIGLELE KATLEDLGQA KRVSITKENS TIIDGAGDQA AIQGRVAQIR QQIEEATSDY
DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKDRVEDAL HATRAAVEEG VVAGGGVALI
RAASKLSSLV GDNEEQNVGI RVALRAMEAP LRQIVKNAGD EESVVANNVR AGEGNYGYNA
ATGVYDDMIE MGILDPTKVT RSALQFAASV AGLMITTEAM ITELPKKDAP AMPDMGMGGM
GGMM
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