| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2230 |
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| Symbol | frdA |
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| ID | 5135760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2380624 |
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| End bp | 2382432 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533686 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001218146 |
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| Protein GI | 147673130 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01176] fumarate reductase, flavoprotein subunit
[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAATTC TCACCACAGA TATCGCAGTC ATCGGCGCTG GTGGCGCTGG TCTTCGTACT
GCTATTGCAG CGGCAGAAGC AAACCCTCAT TTAGAAGTTG CTCTGATTTC TAAAGTTTAT
CCAATGCGTT CTCACACAGT CGCAGCCGAG GGTGGCTCCG CAGCAGTTAT CAAGGATGAA
GATAGTCTAG ATAACCACTT CAACGATACC GTTGGCGGTG GTGACTGGCT ATGTGAACAG
GATGTTGTTG AATACTTTGT TGCCAATGCA ACCCGCGAAA TGATCCAGAT GGAACAATGG
GGTTGTCCTT GGAGCCGTAA AGAGAATGGT GAAGTCAACG TACGTCGCTT CGGCGGCATG
AAAGTTGAGC GCACATGGTT TGCTGCTGAT AAAACCGGCT TCCACATGCT GCACACCCTG
TTCCAAACTT CAATGAAGTA CCCACAAATC AAGCGATTGG ATGAGTACTT TGTGGTGGAT
TTGCTGGTTG ATGAAGGTGA AATCCAAGGT TTGATTGCGA TTCATATGTC GGAAGGCGAG
CTGGTCACCA TCAAAGCTAA GTCGGTTGTT CTAGCCACTG GCGGTGCGGG TCGCGTTTAC
CACTGCAACA CTAACGGCGG CATAGTGACC GGTGATGGTA TGGCGATGGC TTTCCGTCAC
GGTGTTCCTC TGCGTGATAT GGAATTCGTT CAATACCACC CAACAGGCCT ACCAGGTACT
GGTATTCTGA TGACCGAAGG TTGTCGTGGT GAAGGCGGTA TTATCGTCAA CAAACATGGC
TACCGTTACC TGCAAGACTA CGGTATGGGC CCTGAAACTC CAGTGGGTCA ACCAAAGAAC
AAATACATGG AACTGGGTCC ACGTGACAAA GTTTCCCAAG CTTTCTGGCA TGAGCAGCAA
AAAGGCAACA CCATCAAACA CCCACTGGGT GATGTGGTGC ACCTAGACCT GCGCCACTTA
GGTGAAGAAT ACCTGCAAGA ACGTCTGCCA TTTATCTGTG AACTGGCAAA AGCGTATGTC
AACGTTGACC CAGCAAAAGA GCCGATTCCA ATTCGTCCAA CCGTGCACTA CACCATGGGT
GGTATCGAAA CCAATGGCGA ATGTGAAACC CGCATTAAAG GTCTGTTCGC CGTGGGTGAA
TGTGCGTCTG TTGGTCTGCA TGGCGCGAAC CGTTTAGGTT CTAACTCACT AGCGGAATTC
GTAGTCTTTG GCCGCGTTGC TGGTGAAAAA GCGGTTGAGC GCGCTGCAGA GTTTAAAGGC
TGGAATGAAA AAGCCATCGC CGCACAAGTC AAAGCGGTTG AAGATCGCAT CGCAGCACTG
ATGCAGCAAG AAGGTGATGA AAACTGGGCA ACCATCCGTA CAGAAATGGG TCACACCATG
GAAGCGGGTT GTGGTATCTA CCGTCAGGAA GATCTGATGC AAGAAACCAT CGACAAATTG
GCCGAGTTGA AAGAGCGTTA CAAGCGCATC AGCATCAAAG ACAAAGGCAA AGTGTTCAAC
ACTGACCTGC TATACGCGAT TGAAGTAGGT TACGGTCTAG ACGTGGCAGA AGCCATGGTT
CACTCCGCTA TTCTGCGTAA AGAATCGCGC GGCGCACACC AACGTCTTGA TGAAGGTTGC
ACCGAGCGTG ATGACGTGCA ATTCCTCAAA CACTCTTTGG CATTCTATCA AGAAGGTCAA
ACACCGAAGA TCGATTACAG CCCAGTGAAA ATCACCAAGT CGCAGCCAAA AGCGCGTCTG
TACGGTGAAG CAGCCGAAAA AGCTGCCGCA GCTGAAGCGG CCGGAAAAAG CGTAGAGGAG
CAAAAATAA
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| Protein sequence | MQILTTDIAV IGAGGAGLRT AIAAAEANPH LEVALISKVY PMRSHTVAAE GGSAAVIKDE
DSLDNHFNDT VGGGDWLCEQ DVVEYFVANA TREMIQMEQW GCPWSRKENG EVNVRRFGGM
KVERTWFAAD KTGFHMLHTL FQTSMKYPQI KRLDEYFVVD LLVDEGEIQG LIAIHMSEGE
LVTIKAKSVV LATGGAGRVY HCNTNGGIVT GDGMAMAFRH GVPLRDMEFV QYHPTGLPGT
GILMTEGCRG EGGIIVNKHG YRYLQDYGMG PETPVGQPKN KYMELGPRDK VSQAFWHEQQ
KGNTIKHPLG DVVHLDLRHL GEEYLQERLP FICELAKAYV NVDPAKEPIP IRPTVHYTMG
GIETNGECET RIKGLFAVGE CASVGLHGAN RLGSNSLAEF VVFGRVAGEK AVERAAEFKG
WNEKAIAAQV KAVEDRIAAL MQQEGDENWA TIRTEMGHTM EAGCGIYRQE DLMQETIDKL
AELKERYKRI SIKDKGKVFN TDLLYAIEVG YGLDVAEAMV HSAILRKESR GAHQRLDEGC
TERDDVQFLK HSLAFYQEGQ TPKIDYSPVK ITKSQPKARL YGEAAEKAAA AEAAGKSVEE
QK
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