| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2227 |
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| Symbol | secB |
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| ID | 5136141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2378151 |
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| End bp | 2378615 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533683 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_001218143 |
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| Protein GI | 147674386 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0081632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG CAGCACAAGC CCCACAACAA CAGTTTGCTA TCCAACGTAT CTATCTAAAA
GATGTCTCTT TTGAAGCGCC AAGCTCACCA GTGATGTTCC AAAAAGAGTG GAACCCAGAT
GTCAAACTGG ATCTCGACAC GCAAAGCCGT GAACTGGGCC AAGGCGTTTA CGAAGTGGTA
CTGCGCCTGA CAGTGACTGT GAAAAACGCA GAAGAGACCG CATTCCTGTG TGAAGTACAA
CAAGCGGGTA TCTTCAGTGC AGAGCAGATG GAAGCAGGCC AATTGGCCCA TTGCTTGGGT
GCTTTCTGCC CGAACATCCT GTTCCCATAC GCACGTGAAA CCATTTCAAG CCTAGTGGTG
AAAGGTACTT TCCCACAACT GAACCTTGCT CCAGTTAACT TTGACGCGCT GTTCATGAAC
TACCTGCAAC AGCAAGCTCA AGAAGGCGCA ACGGCGAACG CATAA
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| Protein sequence | MAEAAQAPQQ QFAIQRIYLK DVSFEAPSSP VMFQKEWNPD VKLDLDTQSR ELGQGVYEVV
LRLTVTVKNA EETAFLCEVQ QAGIFSAEQM EAGQLAHCLG AFCPNILFPY ARETISSLVV
KGTFPQLNLA PVNFDALFMN YLQQQAQEGA TANA
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