| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2226 |
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| Symbol | gpsA |
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| ID | 5137812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2376927 |
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| End bp | 2377961 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533682 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001218142 |
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| Protein GI | 147673990 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000299974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CACAGAACCA CAATAGCTAC GGAAAACCTG TTGAAATGAC CGTGATAGGT
GCGGGCTCCT ACGGTACCTC ACTGGCGATC TCTTTGGCGC GCAATGGCGC GAATATCGTC
CTGTGGGGAC ATGATGCAGA GCATATGGCG CGCCTTGACG CTGACCGCGC TAACCATGAA
TTTTTGCCCG GAATTGCTTT TCCTGACACT CTGATTGTGG AAACTGACTT GCAAAAAGCG
GTGCAAGCGA GCCGTGATCT GCTGGTGGTA GTGCCTAGCC ATGTGTTTGG TATCGTGTTG
AAAAGTTTGC AGCCACACCT GCGTGCGGAT AGCCGCATTT GTTGGGCAAC CAAGGGGCTA
GAGCCTGAGA CTGGACGGCT ACTCCAAGAT GTCGCCCATG ATGTACTTGG TGATAGCTAC
CCCCTTGCGG TGCTTTCTGG TCCTACTTTT GCCAAAGAGC TGGCGATGGG GATGCCAACC
GCGATTTCAG TGGCTTCGCC GGATGCGCAA TTTGTACGTG ACCTGCAAGA GAAAATTCAC
TGCAGCAAAA CTTTCCGAGT GTACGCCAAC AGTGACTTTA TCGGTATGCA GCTTGGCGGC
GCGGTAAAAA ACGTGATTGC GATTGGTGCG GGGATGTCTG ATGGTATTGG CTTTGGCGCG
AATGCGCGAA CCGCTCTTAT CACTCGTGGC TTGGCTGAAA TGAGCCGCTT AGGCGCCGCT
TTAGGCGCGC AGCCGGAAAC TTTTATGGGT ATGGCAGGAT TAGGTGATTT AGTGCTGACT
TGTACTGACA ACCAATCGCG TAACCGCCGT TTTGGTTTGG CACTAGGTCA AGGTAAAGAT
GTGGATACCG CGCAAACCGA TATCGGCCAA GTGGTTGAAG GGTATCGCAA CACCAAAGAA
GTGTGGATGT TAGCGAAACG CATGGGCGTT GAGATGCCGA TAGTTGAACA AATTTACCAA
GTATTGTATC AAGGAAAAGA TGCGCGACTC GCCGCTCAGG ATTTGCTGGC ACGAGATAAG
AAGATGGAGC GTTAA
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| Protein sequence | MSETQNHNSY GKPVEMTVIG AGSYGTSLAI SLARNGANIV LWGHDAEHMA RLDADRANHE
FLPGIAFPDT LIVETDLQKA VQASRDLLVV VPSHVFGIVL KSLQPHLRAD SRICWATKGL
EPETGRLLQD VAHDVLGDSY PLAVLSGPTF AKELAMGMPT AISVASPDAQ FVRDLQEKIH
CSKTFRVYAN SDFIGMQLGG AVKNVIAIGA GMSDGIGFGA NARTALITRG LAEMSRLGAA
LGAQPETFMG MAGLGDLVLT CTDNQSRNRR FGLALGQGKD VDTAQTDIGQ VVEGYRNTKE
VWMLAKRMGV EMPIVEQIYQ VLYQGKDARL AAQDLLARDK KMER
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