| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2210 |
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| Symbol | |
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| ID | 5135372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2357878 |
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| End bp | 2358468 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533666 |
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| Product | putative fimbrial assembly protein PilN |
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| Protein accession | YP_001218126 |
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| Protein GI | 147675508 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0329784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATGT TGCATAAGGT CAACTTACTG CCGTGGCGTG ATGCACGGCG TGAAGCACAT
AAGCGGCGCT TTTTGGGGTT AGTGACACTC GGTGTTTTGC TGGCGGTGTT GATGCAATTT
GCAGCAGGCG AATACTTGGG CGGACAAATG GCTTTGCAAC AAGAGCGGAT TGGTTATTTG
CAACAACATA TCTTCTCGCT GGATCAGCAG ATCGCTAAGT TGAAGATCGC TGAAGAAGAA
CATAAGGCGT TATTGACCCG TTTGACTGTG GTGGAGCAAC TGCAGCAAAA GCGCAATAAA
ACGACTGAGT TTATGAACCA AATGCCCAAC CTGATCCCTG AAGGCGTCTA TGTCGACAAG
ATCAAGATGA ATGGCCATCA GATAGAAATA ACCGGGATTA GCGATTCCAC CGCTCGCTTG
GCAACCATGC TCGATAACTT GGAGAAGTCG GACAAATTAA CCGATGTTGA AATGCATGAA
ATCGTTTCAG GGAATAAGCG ATTTGGTAAG CAATTTCAGA GCTTTAAAGT CTCCTTCCAA
ATTTTAACCC CAGCCTCTAA CCCGCAAGCG GGAGGTGCAC ACAATGGCTA G
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| Protein sequence | MSMLHKVNLL PWRDARREAH KRRFLGLVTL GVLLAVLMQF AAGEYLGGQM ALQQERIGYL
QQHIFSLDQQ IAKLKIAEEE HKALLTRLTV VEQLQQKRNK TTEFMNQMPN LIPEGVYVDK
IKMNGHQIEI TGISDSTARL ATMLDNLEKS DKLTDVEMHE IVSGNKRFGK QFQSFKVSFQ
ILTPASNPQA GGAHNG
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