| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2209 |
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| Symbol | |
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| ID | 5135875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2357295 |
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| End bp | 2357894 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533665 |
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| Product | putative fimbrial assembly protein PilO |
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| Protein accession | YP_001218125 |
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| Protein GI | 147674321 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00186051 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACACAA TGGCTAGTCT ACAAGAGCTA GAACTGGATG AAATTAGTGA ATGGCCGCTG
CTGCCTCAGT TGGTGGTGAT TCTGCTTATC ATGCTACTGA TCCAAGGTGC TGGTTATTGG
TTCTATCTCA TGCCCAAACA AGACGAGATT GCGCTGTTAA AGCAGGAAGA GGAAACCGTC
AAGGCGACAC TGCGCATCAA AGCCAATAAA GTGGCGGTAT TGCCGCAGAT CCAAGCTCAG
TTGGACGAGC TCAAAGAGCG TTACGATTTT TTACTGCGCC AGCTACCGGT GCAAAAAGAG
TTAGCCAGCA TGCTGGCGTC AGTCAACCAG CTTGGGCTCG ATAGTTCGCT TACCTTTACG
CGGATTGATT GGGGGGAGCG TGAAAGCCAA GAGTTTCTTT ACCGCTTACC GCTCAATATC
GAACTGACGG GGAGCTATCA CGATATTGGC GATTTTTCGC AAGCGATTGC CAAGTTACCG
CGCATCATCA ACTTCGACGA TGTGGACTGG CAGCGTGTCA GCCAAGAGAG TAGCACGCTG
CACTTTCGAG TCAGAGCCTA CACCTACCAA TTTAAGCAGG AGGTGGATGA TGAAAAATAA
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| Protein sequence | MHTMASLQEL ELDEISEWPL LPQLVVILLI MLLIQGAGYW FYLMPKQDEI ALLKQEEETV
KATLRIKANK VAVLPQIQAQ LDELKERYDF LLRQLPVQKE LASMLASVNQ LGLDSSLTFT
RIDWGERESQ EFLYRLPLNI ELTGSYHDIG DFSQAIAKLP RIINFDDVDW QRVSQESSTL
HFRVRAYTYQ FKQEVDDEK
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