| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2201 |
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| Symbol | gph |
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| ID | 5137286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2349288 |
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| End bp | 2349968 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533657 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001218117 |
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| Protein GI | 147673858 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATCCA TAAAATTAAT TGCTTTTGAT TTGGATGGTA CGCTGCTCGA CAGTGTGCCG
GATTTAGCGG TAGCGGCGGA TCAAGCGGCG CGTGCGGTCA GCTATCCGGC GGTGAGCGAA
GCGCAGGTGC GTGATTATGT CGGCAACGGT GCGGATGTGT TGATTGCGCG CGCACTCAGC
CAGAGCTTAA CGATCAATCC TGAATTAAGC CCAGAGCTAC GTGCTCAAGC GCGTCACCTG
TTTGATGAGT TTTATGAACA AACGGGGCAC AAGCTGAGCC ACCTGTATCC TAATGTTAAA
ACCACGCTTT TAGAGCTGCA TCAAGCGGGC TTTATTCTGG CGCTCGTGAC CAATAAGCCT
TCTAAATTTG TGCCAGATGT TCTAGAGCAA CACGGCATCG CGCACTTTTT CAGTGATGTG
ATTGGCGGCG ATACCTTCCC GAATAAAAAG CCGGATCCGA TGGCGCTGAA TTGGTTATTA
GAGAAGCATC AGTTAAGCGC TGAGCAAATG TTGATGGTCG GGGATTCGAA AAACGACATT
CTGGCGGCAA AAAATGCTGG GTGTTATTCC TTCGGTTTAA CCTACGGTTA TAACCACGGC
GAACCGATTG CCAATGCGGA GCCAGACTTC GTCTCCGATG ATATTGGCAC GCTGCTTGAA
GTGGTGCTCG TTTCGGCGTA A
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| Protein sequence | MKSIKLIAFD LDGTLLDSVP DLAVAADQAA RAVSYPAVSE AQVRDYVGNG ADVLIARALS
QSLTINPELS PELRAQARHL FDEFYEQTGH KLSHLYPNVK TTLLELHQAG FILALVTNKP
SKFVPDVLEQ HGIAHFFSDV IGGDTFPNKK PDPMALNWLL EKHQLSAEQM LMVGDSKNDI
LAAKNAGCYS FGLTYGYNHG EPIANAEPDF VSDDIGTLLE VVLVSA
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