| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2193 |
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| Symbol | astD |
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| ID | 5136636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2337776 |
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| End bp | 2339233 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533649 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001218109 |
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| Protein GI | 147675138 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATT GGATAGCCGG TGAATGGGTT GCGGGAACCG GTGAAAAGCT GGAATCACAT
ACGCCTTATA GCCATGAGCT TTTATGGCAA GGTTACAGCG CTAGTGGCGA GCAAGTCGAC
GCGGCGGTGA AGGCCGCTCG CCGCGCTTTT CTCGACTGGA AAAAACGCCC ATTTGCTGAG
CGTGAACAGA AGGTGTTGGC CTTTGCGGAA TTGGTGAAAG CCAACAGCGA ACAGATTGCG
CAAGTGATTG CTAAAGAGAC GGGCAAGCCT TTGTGGGAAA CGCGCACGGA AGCGGCGTCG
ATCGCCGGAA AAATCGCAAT TTCGATTCGT GCTTATCATG AGCGTACCGG TGAAACCGTG
CGTGAAGCGG CGGGTAATCA GCTGGTATTG CGCCATCGGC CGCTGGGCGT GATGGCGGTG
TTTGGGCCGT ATAACTTCCC CGGCCACTTG CCCAATGGGC ATATTGTGCC AGCTCTGCTC
GCGGGCAATA CCGTGGTTTT CAAACCTTCC GAACAAACGC CGTGGACTGG CGAAGTTTTG
ATGCAGTTAT GGCAACAGGC TGGCTTGCCT GCTGGTGTCA TCAATCTGGT TCAAGGCTCA
AAAGAGACGG GGATTGCGCT CGCGCAATCC CGCGGGATTG ATGGTTTGCT GTTTACGGGG
AGTGCCAATA CTGGGCATCT GCTGCATCGC CAATTTGCAG GTCAGCCGGA CAAAATGCTG
GCGCTGGAAA TGGGCGGCAA TAACCCTATG GTGATTTCAG AGCACTATGG CGATCTGGAT
GCCACGGTTT ACACCATTAT TCAATCGGCG TTTATCAGCA GTGGTCAACG CTGCACCTGT
GTGCGTCGCT TGTATGTGCC ACAAGGGACG AAAGGCGATG CACTGCTCGA TAAACTGGTT
TCCGTAACGG CCAAGCTGCG TATTGATCAG CCCTTTGCTG AACCCGCACC CTTTATGGGG
CCGTTAGTTT CTGAAGCGGC AGCACAAGCG ATCCTCAAGG CGCAAGCAGA TCTACAAGCG
CTAGGTGGAA AAAGTCTACT TGAAGCTCGC GCCTTGCATG CGGCGTTTAT CACTCCGGCC
ATCATAGATG TGACGGCGAT TGAGCGCTTA CCGGATGATG AGTATTTCGG GCCTTTGCTG
CAAGTGGTGC GTTACCAGAC TTTGGCGCAA GCGGTAGAGC TTGCCAATGA TACCCGCTTT
GGCTTATCCG CTGGGCTTGT CTCGACGGAT GATGGCGAGT GGGATTATTT TGTCGAACAT
ATTCGTGCGG GTATCGTCAA TCGTAACCGC CAATTAACCG GAGCCAGTGG AGATGCGCCA
TTTGGTGGCC CAGGAGCATC GGGCAACTTA CGCCCCAGTG CCTTCTATGC CGCCGACTAT
TGCGCTTATC CGATGGCCTC AATGGAAGGG GATACAACGC TGCTTCCTGC TACCTTGAGC
CCGGGTGTTG AACTCTAA
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| Protein sequence | MTHWIAGEWV AGTGEKLESH TPYSHELLWQ GYSASGEQVD AAVKAARRAF LDWKKRPFAE
REQKVLAFAE LVKANSEQIA QVIAKETGKP LWETRTEAAS IAGKIAISIR AYHERTGETV
REAAGNQLVL RHRPLGVMAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS EQTPWTGEVL
MQLWQQAGLP AGVINLVQGS KETGIALAQS RGIDGLLFTG SANTGHLLHR QFAGQPDKML
ALEMGGNNPM VISEHYGDLD ATVYTIIQSA FISSGQRCTC VRRLYVPQGT KGDALLDKLV
SVTAKLRIDQ PFAEPAPFMG PLVSEAAAQA ILKAQADLQA LGGKSLLEAR ALHAAFITPA
IIDVTAIERL PDDEYFGPLL QVVRYQTLAQ AVELANDTRF GLSAGLVSTD DGEWDYFVEH
IRAGIVNRNR QLTGASGDAP FGGPGASGNL RPSAFYAADY CAYPMASMEG DTTLLPATLS
PGVEL
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