Gene VC0395_A2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2187 
Symbol 
ID5136735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2333113 
End bp2333598 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID640533643 
Producthypothetical protein 
Protein accessionYP_001218103 
Protein GI147675154 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.45701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG AGCACGCCAA ACCAAGATTA ACACTGGAAA GACTCTGGCA ATTCAGTTTG 
CAGTATTACA GTGTGCGCGA GGTAAAAGAG GCGTGCTTAC GATTGCAAAA TAGCCATCAC 
GGCAATGTCA ATCTGCTGCT GTTACTCAAA TGGCTAGATG AACAGCAGCT CACTTTTGCG 
GAAACTGACT GGCCGACGGT GCTGGAATGT TTGAGTCATT CGGAAACTCT GCTGCACGAT 
TTTCGTGATT TGCGGCGACG CTTGAAAAGC CATTTGCCAG ACACGCTCTA TCGCGAGGCT 
CTGCAGTTTG AGCTGCAATT AGAAAAGCAA CAGCAAGCGG ATTTGGTCCA TTGTCTCAAT 
CGAATGACAC TTCATCCTGC GCAAGATCTA TCGCTCACTC TGCAATACTG TAAAATGCTT 
GGCGCAGAAT ACTTAGCCGA GCTTTTTTCA GCTCCGTACC GAGAATCCGA TACTCCAACA 
TCATGA
 
Protein sequence
MSDEHAKPRL TLERLWQFSL QYYSVREVKE ACLRLQNSHH GNVNLLLLLK WLDEQQLTFA 
ETDWPTVLEC LSHSETLLHD FRDLRRRLKS HLPDTLYREA LQFELQLEKQ QQADLVHCLN 
RMTLHPAQDL SLTLQYCKML GAEYLAELFS APYRESDTPT S