| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2178 |
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| Symbol | |
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| ID | 5135516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2322492 |
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| End bp | 2324360 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533634 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218094 |
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| Protein GI | 147674403 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000141433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGTCCA ACCAATCCCA TTTGCTACGG GGATTCCACA TGTTATTGAT GATAAAAAAG
AATATAGAGT GGCTTTTTAG TCACTTTATT TTGAATGCTG TTTTATTAGC TGTATTGGGC
CTCCCCTATT TGCAATGGAT GGAGGTCAGC AGCAGTAATA GGGTAGCGTA CGCTTATCTT
TCGGCCACCC AGTTTGGCTG GTTTGGGTTA TTTGCCTTTG CCATCACGCT GGTTTCACTC
GCTCTGGTTT GGCTCCCGAG TCGCCTACTG CACGGTGTTG TGTTTGTAGC CTCTTGGGCC
GTGAGCATTT TGTTGATGGT CGATATTGAA GTGTATCAAC AGTACCGATT CCATCTGAGT
GGCTTTGTGT GGGATTTGCT GTTGCATGGT GGACAGCAAG TGATCAGCGT GTCGTGGTAT
ACCCTTGCGA TGGCAGGCTT TATTGTCTTC GTGGTCGGCT TTGCCCAATG GCTCATCATG
AAACTGGCGC AACGCATTCA ACATTCACGT GGAGTTCGCT GGGTATCGGC GGTTTGGTTA
CTTTCATTGC TGAGTAGCCA GTTTATCCAC GCTTGGAAAG ATGCCACTTA TGACAGTGAG
ATCCCAAGCT ACAGCTATCA CTGGCCGCTC TATTATCCGT TGACCGCAAA ACGCTTTTTC
GACCAGCTCG GTGTTGTTGA TGCGCAATCC GCCCGCCGTC AGCAGGTGGA TTTTCATGCA
CCAACCAGCA GTACTCTCAA CTATCCGCTG CGACCTCTGC ACATTGAACC GCCTGCAGAG
CGCCCAAACA TTTTATTGAT TGGGATTGAT GCTTGGCGTT TTGATGATGC CAATCGCGAT
GTGACGCCCA ACATTGCTCA CTTTGGTCAA CAAGCCACGC GCTTTACTCA TCACTTAAGT
GGTGGAAATT CAACCCAAGC TGGCTTATTC AGTCTCTTTT ACGGCTTACC CGCTACCTAT
TGGGAGGAGT TTCAAACCAG CCAAACTCGC CCACTGCTGA TGCAAACTCT CGCAGATTTG
AACTATCAGT TTGCTATTTA CGGCTCGGCA CCACTCAATA GCCCACCGTT TGACCGAACG
ATATTCAGCA AAATTGCCCA GCTACGTACA GTCACGCCTG GAGAAAACTC ACCACAGCGT
GATGAACGTA TTACTGAGGA TTTTTTGCAC TTTTTAGAGC AACGGGATCG TAGCAAGCCC
TACTTCGGTT TTCTGTTTTA CGATTCAGCG CATGCGGCTG ATTTCCCAAG CTCGATGACA
CCACCTTTCA CCCCTTATTG GGAGCGAGTC GATCACATCA AACTCAACAA CGATTTTGAT
CCCGAGCCGT ACCATAACCG CTATCGCAAT GCCCTCTATT ACGCTGATAG TTTGATTGGC
AAAGTTCTTG AGCAGTTGCA AGCCCGTGAT GAGCTGCGCA ATACCATAGT GATCATCACA
TCCGATCATG GTGAAGAGTT TAATGACAAT CGACAAAATT ATTGGGGACA TGGCAGTAAC
TACAGCATGG CGCAGATCCA TGTACCACTT TACATCTACA TTCCTGACAA AGAAGGAAGC
GTATTAACGC ACAAAACCAC CCACCTCGAT ATTGCGCCTA TGTTGATGCA AGAAGTGTTA
GGGGTACAAA ATCCACTCAA TGAATTTGCG TTAGGCTACC CGCTTTGGCA AGAGAGCCCA
CAACGGGAAT GGACGATTAT CGGTAGTTAC TTTAACTATG CGTTAGTGAG TGATAAAGAG
ATGTTGGTGA GCTACCCCAC CGGGCGAGTC GAGACTCTCA ATTCAGAACT TGCCCCAGAG
AAAGAGCGTC AAATTTCGAC TCAGCAGATC ATGCAGGCGC TTGAAGAGAT GCGGCAATTC
TTGCGCTAA
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| Protein sequence | MLSNQSHLLR GFHMLLMIKK NIEWLFSHFI LNAVLLAVLG LPYLQWMEVS SSNRVAYAYL
SATQFGWFGL FAFAITLVSL ALVWLPSRLL HGVVFVASWA VSILLMVDIE VYQQYRFHLS
GFVWDLLLHG GQQVISVSWY TLAMAGFIVF VVGFAQWLIM KLAQRIQHSR GVRWVSAVWL
LSLLSSQFIH AWKDATYDSE IPSYSYHWPL YYPLTAKRFF DQLGVVDAQS ARRQQVDFHA
PTSSTLNYPL RPLHIEPPAE RPNILLIGID AWRFDDANRD VTPNIAHFGQ QATRFTHHLS
GGNSTQAGLF SLFYGLPATY WEEFQTSQTR PLLMQTLADL NYQFAIYGSA PLNSPPFDRT
IFSKIAQLRT VTPGENSPQR DERITEDFLH FLEQRDRSKP YFGFLFYDSA HAADFPSSMT
PPFTPYWERV DHIKLNNDFD PEPYHNRYRN ALYYADSLIG KVLEQLQARD ELRNTIVIIT
SDHGEEFNDN RQNYWGHGSN YSMAQIHVPL YIYIPDKEGS VLTHKTTHLD IAPMLMQEVL
GVQNPLNEFA LGYPLWQESP QREWTIIGSY FNYALVSDKE MLVSYPTGRV ETLNSELAPE
KERQISTQQI MQALEEMRQF LR
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