| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2176 |
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| Symbol | |
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| ID | 5136760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2319132 |
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| End bp | 2319875 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533632 |
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| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
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| Protein accession | YP_001218092 |
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| Protein GI | 147673348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000213076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATG AATTGATTTA TGGCATCCAC GCCGTGAACG CGGTACTACA ACGCGATCCC
GCGCGTTTTG TCGAAGCGTA TGTGCTTAAA GGTCGTCAGG ACGATCGCCT GCTGCCGGTA
CTCAACGAAT TGATGCGTCT TGGCGTCTCA ATTCAAGAGA TGAGCCGCAA AGCGCTGGAT
GACAAAGCGG AAGGCGCCAA TCATCAAGGA TTGATTGCCC GTGTTAAACC TGCTCGTCAA
CTCAATGAAA ATGACCTTGA CGATATCCTC GCTCAGCATG AGCAACCCCT GTTGTTAGTA
CTGGATGGGG TAACTGATCC GCACAACCTC GGGGCTTGCC TGCGTAATGC CGATGCGGCA
GGTGTGGCGG CAGTCATTGT TCCGAAAGAC AAATCAGCAC CACTGACCGC GACCGTCAGT
AAAGTGGCGT GTGGCGCGGC GGAAACGGTA CCGCTCGTGC GCGTTACTAA CTTGGCGCGT
ACCATGCGCG CACTGCAAGA AAAAGGTGTC TGGTTTGTAG GGACTGCAGG CGAAGCGACT
CATGATATCT ATCAAAGCAA ACTGACCGGG CCGCTGGCGA TTGTAATGGG CGCAGAAGGG
GATGGCATGC GTCGTTTAAC GCGTGAAACC TGTGATGATT TGATTAAAAT CCCGATGGCA
GGCAGCGTAT CAAGTCTAAA CGTGTCTGTA GCTTGTGGTG TCTGTTTATT TGAAGCAGTA
CGCCAGCGTA TGGCGAATCG GTAA
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| Protein sequence | MSNELIYGIH AVNAVLQRDP ARFVEAYVLK GRQDDRLLPV LNELMRLGVS IQEMSRKALD
DKAEGANHQG LIARVKPARQ LNENDLDDIL AQHEQPLLLV LDGVTDPHNL GACLRNADAA
GVAAVIVPKD KSAPLTATVS KVACGAAETV PLVRVTNLAR TMRALQEKGV WFVGTAGEAT
HDIYQSKLTG PLAIVMGAEG DGMRRLTRET CDDLIKIPMA GSVSSLNVSV ACGVCLFEAV
RQRMANR
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