Gene VC0395_A2173 details

Gene Information

• Locus tag: VC0395_A2173
• Symbol: rplD
• ID: 5136902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2317087
• End bp: 2317689
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640533629
• Product: 50S ribosomal protein L4
• Protein accession: YP_001218089
• Protein GI: 147673082
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000174601
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTGA TGGTTAAAGG TGCTAACGCA CTAACTGTTT CCGAAACTAC TTTCGGACGT 
GAGTTCAACG AAGCTCTTGT ACACCAAGTA GTTGTTGCTT ATGCAGCAGG TGCTCGTCAA 
GGTACTCGTG CTCAAAAGAC ACGTTCAGAA GTTTCTGGCG GTGGCGCTAA GCCATGGCGT 
CAAAAAGGTA CTGGCCGTGC ACGTGCTGGT ACAATCCGTA GCCCAATCTG GCGTACAGGT 
GGTGTTACTT TTGCTGCGAA ACCACAAGAT CACAGCCAAA AAGTAAACAA GAAAATGTAC 
CGTGGTGCTA TGAAGAGCAT TCTGTCTGAG CTAGTTCGTC AAGAGCGTTT GATCGTTGTT 
GAAAACTTCT CAGTTGAAGC TCCAAAGACC AAAGCTCTGG TAGCTAAGCT AAAAGAACTT 
GAGCTGAACG ATGTTCTCAT CGTTACTGGC GAAGTAGACG AAAATCTGTT CTTAGCTGCG 
CGTAACCTGT ACAAAGTTGA CGTGCGTGAC GTAACTGGTA TCGACCCAGT AAGCCTGATC 
GCATTTGACA AGGTTCTAAT GACTGCTGCT GCAGTTAAGC AAGTTGAGGA GATGCTGGCA 
TGA 

 

Protein sequence

MELMVKGANA LTVSETTFGR EFNEALVHQV VVAYAAGARQ GTRAQKTRSE VSGGGAKPWR 
QKGTGRARAG TIRSPIWRTG GVTFAAKPQD HSQKVNKKMY RGAMKSILSE LVRQERLIVV 
ENFSVEAPKT KALVAKLKEL ELNDVLIVTG EVDENLFLAA RNLYKVDVRD VTGIDPVSLI 
AFDKVLMTAA AVKQVEEMLA