| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2169 |
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| Symbol | rplV |
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| ID | 5137334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2315305 |
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| End bp | 2315637 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533625 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001218085 |
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| Protein GI | 147675261 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000951613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCTA TCGCTAAACA TAACTTTGCT CGTATTTCTC CTCAGAAAGC TCGCTTAGTT
GCAGACCAAA TCCGCGGTAA ATCTGTGGAT CAAGCGCTAG AACTTCTGAC TTTCAGCAAC
AAAAAAGCGG CTGAACTGGT TAAGAAAGTT CTGGAATCTG CAATCGCGAA CGCAGAGCAC
AACGAAGGTG CGGACATCGA CGATCTACGT GTCGCTAAAA TCTTCGTAGA TGAGGGCCCA
GTCATGAAGC GTATTATGCC TCGTGCTAAA GGCCGTGCGG ATCGTATCTT GAAGCGTTCA
AGCCACATTA CTGTGGTTGT CGCAGATCGC TAA
|
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| Protein sequence | MEAIAKHNFA RISPQKARLV ADQIRGKSVD QALELLTFSN KKAAELVKKV LESAIANAEH
NEGADIDDLR VAKIFVDEGP VMKRIMPRAK GRADRILKRS SHITVVVADR
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