| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2165 |
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| Symbol | rpsQ |
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| ID | 5136577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2313717 |
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| End bp | 2313971 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640533621 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001218081 |
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| Protein GI | 147673772 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000168 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACA AAATTCGTAC TCAACTAGGT CGTGTTGTTA GCGACAAGAT GGACAAGTCT
ATCGTTGTTG CTATCGAGCG CATGGTGAAG CACCCTATCT ACGGTAAATT CGTTAAGCGC
ACGACTAAAG TACACGCACA TGACGAAAAC AACGAGTGTG GCATTGGCGA CACTGTTGAA
ATTCGTGAAT GTCGTCCACT GTCTAAGACT AAGTCTTGGA CTCTGGTGAA AATTGTAGAA
AAAGCGAAGA TGTAA
|
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| Protein sequence | MSDKIRTQLG RVVSDKMDKS IVVAIERMVK HPIYGKFVKR TTKVHAHDEN NECGIGDTVE
IRECRPLSKT KSWTLVKIVE KAKM
|
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