Gene VC0395_A2155 details

Gene Information

• Locus tag: VC0395_A2155
• Symbol: rplO
• ID: 5135335
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2309492
• End bp: 2309926
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640533611
• Product: 50S ribosomal protein L15
• Protein accession: YP_001218071
• Protein GI: 147674243
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000156798
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATTGA ATACTCTATC ACCGGCTGCG GGTTCTAAAC ATGCTCCTAA GCGTTTAGGT 
CGTGGTGTCG GTTCAGGCCT TGGTAAAACA GGTGGCCGTG GTCACAAAGG TCAAAAGTCA 
CGTTCTGGCG GCAAAGTACG TCCAGGTTTT GAAGGCGGTC AAATGCCTCT GAAACAACGT 
CTACCAAAAT TCGGCTTCAC TTCTCGTAAG AGCTTTGTGT CTGCTGAAGT TCGTCTGTCT 
GAACTGGCGA AAGTAACTGG TGACGTAGTT GATCTGAACG CTCTGAAAGC GGCAAACCTT 
GTTACTAAAA ACATCGAGTT TGCAAAAATC GTTCTTTCTG GCGAGATCAG CAAAGCAGTG 
ACTGTAAAAG GTCTGCGCGT GACTAAAGGC GCTAAAGCTG CAATCGAAGC TGCAGGCGGT 
AAAATCGAGG AATAA 

 

Protein sequence

MLLNTLSPAA GSKHAPKRLG RGVGSGLGKT GGRGHKGQKS RSGGKVRPGF EGGQMPLKQR 
LPKFGFTSRK SFVSAEVRLS ELAKVTGDVV DLNALKAANL VTKNIEFAKI VLSGEISKAV 
TVKGLRVTKG AKAAIEAAGG KIEE