| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2148 |
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| Symbol | rplQ |
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| ID | 5135184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2304992 |
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| End bp | 2305378 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533604 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001218064 |
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| Protein GI | 147674916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000146092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTC AACCGCAACA GCAGTCATCG CAAAGCGATG
TTCAGCAACA TGGCTAGCTC TCTAGTACGT CATGAAGTTA TCAAGACTAC TTTGCCAAAA
GCGAAAGAGC TGCGTCGCGT CGTTGAGCCT TTGATTACAC TAGCTAAGAC TGACAGTGTT
GCTAACCGTC GTCTAGCATT TGCTCGCACT CGTGATAACG AAGTGGTAGC AAAACTGTTT
AACGAACTAG GTCCACGTTT CGCTGCACGT CAAGGCGGCT ACACTCGTAT TCTGAAGTGT
GGTTTCCGTG CAGGTGACAA AGCTCCAATG GCATACATTG AGCTGGTTGA TCGCCCAGAA
GCTGCTGTTG AAGCTGCTGC TGAGTAA
|
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| Protein sequence | MRHRKSGRQL NRNSSHRKAM FSNMASSLVR HEVIKTTLPK AKELRRVVEP LITLAKTDSV
ANRRLAFART RDNEVVAKLF NELGPRFAAR QGGYTRILKC GFRAGDKAPM AYIELVDRPE
AAVEAAAE
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