Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2142 |
Symbol | |
ID | 5135556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2300901 |
End bp | 2301350 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533598 |
Product | acetyltransferase |
Protein accession | YP_001218058 |
Protein GI | 147674368 |
COG category | [R] General function prediction only |
COG ID | [COG2153] Predicted acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000170191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAACT GGCAATGTAT CCCTTTTTGC CAATTAACCA CCCAACAGCT GTACGAACTA CTCAAACTGC GTGTCGATGT TTTTGTGGTC GAGCAGACCT GCCCCTACCC GGAATTGGAT AACAAAGATA CGCTCAACGA AGTGCATCAC CTACTGGGTT ATCAAGATGG AGAGCTCGTC GCTTGCGCAC GTCTACTGCC TGCAGGGGTG AGCTATCCTA GTGTTAGCCT TGGCCGTGTG GCGACTAAGG CCAGTGCACG TGGCAATGGC TTAGGACACC AACTATTGCA AACGGCACTT GAGCAGTGTC AAAACTTATG GCCACAACAA TCGATTGAAA TTGGTGCACA GGAGCATCTG CGCGAGTTTT ATGCTCGCTA TGGCTTTGTC GCAACCTCAG AAACCTATCT AGAAGATGGC ATTCCTCACA TTGATATGAA AAGAGCCTAA
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Protein sequence | MINWQCIPFC QLTTQQLYEL LKLRVDVFVV EQTCPYPELD NKDTLNEVHH LLGYQDGELV ACARLLPAGV SYPSVSLGRV ATKASARGNG LGHQLLQTAL EQCQNLWPQQ SIEIGAQEHL REFYARYGFV ATSETYLEDG IPHIDMKRA
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