Gene VC0395_A2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2142 
Symbol 
ID5135556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2300901 
End bp2301350 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID640533598 
Productacetyltransferase 
Protein accessionYP_001218058 
Protein GI147674368 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000170191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACT GGCAATGTAT CCCTTTTTGC CAATTAACCA CCCAACAGCT GTACGAACTA 
CTCAAACTGC GTGTCGATGT TTTTGTGGTC GAGCAGACCT GCCCCTACCC GGAATTGGAT
AACAAAGATA CGCTCAACGA AGTGCATCAC CTACTGGGTT ATCAAGATGG AGAGCTCGTC
GCTTGCGCAC GTCTACTGCC TGCAGGGGTG AGCTATCCTA GTGTTAGCCT TGGCCGTGTG
GCGACTAAGG CCAGTGCACG TGGCAATGGC TTAGGACACC AACTATTGCA AACGGCACTT
GAGCAGTGTC AAAACTTATG GCCACAACAA TCGATTGAAA TTGGTGCACA GGAGCATCTG
CGCGAGTTTT ATGCTCGCTA TGGCTTTGTC GCAACCTCAG AAACCTATCT AGAAGATGGC
ATTCCTCACA TTGATATGAA AAGAGCCTAA
 
Protein sequence
MINWQCIPFC QLTTQQLYEL LKLRVDVFVV EQTCPYPELD NKDTLNEVHH LLGYQDGELV 
ACARLLPAGV SYPSVSLGRV ATKASARGNG LGHQLLQTAL EQCQNLWPQQ SIEIGAQEHL
REFYARYGFV ATSETYLEDG IPHIDMKRA