Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2141 |
Symbol | dbpA |
ID | 5136941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2299293 |
End bp | 2300675 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533597 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_001218057 |
Protein GI | 147673597 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0253787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGCCA ACTCTTTTGC TGCTTTGAAT CTGAAGCCTG AACTTCTTGC TAACCTTGAA ACCATGGGGT TTGCCACTAT GACTCCGATT CAGGCGCAAT CTCTTCCTGC GATCCTTAAA GGGCAGGATG TGATTGGCCA AGGCAAAACA GGCTCCGGTA AAACCGCTGC GTTTGGTCTT GGGGTACTCT CCAACCTCAA TGTGAAGCGC TTTCGTGTGC AAGCCTTGGT GCTGTGTCCA ACACGTGAGT TGGCCGATCA AGTCGCGACC GATATTCGTA CGCTAGGGCG TGCTATCCAC AATATCAAAG TGTTGACGCT GTGTGGCGGT ATGCCAATGG GGCCGCAGAT CGGATCCCTT GAGCATGGCG CGCATATCTT GGTCGGAACG CCGGGACGGA TTTTGGATCA TTTGAGTAAA GATCGTATCG ATCTGAGTGA GCTCAATACC TTGGTATTGG ATGAAGCTGA CCGCATGCTC GAAATGGGTT TCCAAGAAGC GCTGGAGGCG ATCATTGCTG CCGCGCCAGC CGAGCGTCAA ACCTTGCTGT TTAGTGCAAC TTACCCCACC AGCATTGAGC AGATTGCGCA AAGTGTGACT CGCAATGCGC TGATGATTAA AGTTGAGGCG ACCCACGATA CTTCAAGCAT TCGTCAATAT TTCTACAAAG TAGAAGGCAG TGCTGCGCGT GATGAGGCTC TGGAAACGTT GCTCTTGCAC CATCAACCGA CTTCTTCGGT GGTGTTCTGT AACACCAAAC GTGAAGTACA AAATGTTGCC GATGCCCTGC ATCAAAGCGG TTTTAGCGTG ATTGAACTGC ATGGTGATAT GGAGCAGCGT GAGCGCGACC AAGCCTTAGT GCAATTTGCC AATAAGAGTA TTTCTATTCT GGTCGCGACC GATGTTGCGG CTCGTGGTCT GGATGTCGAT AACCTTGATG CAGTGTTTAA CTACGATCTG TCTCGCGATC CTGAAGTGCA TGTACATCGC ATCGGGCGTA CTGGTCGTGC GGGAAGTAAG GGCTTAGCGT TTAGCTTCTT TAGTGACAAT GAGAGCTACC GTGTGGCGCA AATTGATGAG TACATGGATA TCGCGATTGA ACCTTCAACC TTGCCGCAAC CAGCTGCAGG CGCTCGTCCT TACGCGGCGA ATATGGTCAC CATTCAGATT GACGGTGGTA AGAAAGATAA GGTGCGTCCC GGTGATATCC TTGGCGCACT GACCAGTGAT GGCGAACTGA CCGCGGAGCA TATCGGCAAG ATTAACCTGT TCCCGATGCG TGCTTATGTG GCCGTGCAGA AGAAAATCGC CCACAAAGCT CTGAATAAAA TTGCCAACGG TAAGATGAAG GGACGCCAGT TCCGCGCTCG CTTACTCAAA TAA
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Protein sequence | MNANSFAALN LKPELLANLE TMGFATMTPI QAQSLPAILK GQDVIGQGKT GSGKTAAFGL GVLSNLNVKR FRVQALVLCP TRELADQVAT DIRTLGRAIH NIKVLTLCGG MPMGPQIGSL EHGAHILVGT PGRILDHLSK DRIDLSELNT LVLDEADRML EMGFQEALEA IIAAAPAERQ TLLFSATYPT SIEQIAQSVT RNALMIKVEA THDTSSIRQY FYKVEGSAAR DEALETLLLH HQPTSSVVFC NTKREVQNVA DALHQSGFSV IELHGDMEQR ERDQALVQFA NKSISILVAT DVAARGLDVD NLDAVFNYDL SRDPEVHVHR IGRTGRAGSK GLAFSFFSDN ESYRVAQIDE YMDIAIEPST LPQPAAGARP YAANMVTIQI DGGKKDKVRP GDILGALTSD GELTAEHIGK INLFPMRAYV AVQKKIAHKA LNKIANGKMK GRQFRARLLK
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