Gene VC0395_A2127 details

Gene Information

• Locus tag: VC0395_A2127
• Symbol: msrA
• ID: 5137364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2285857
• End bp: 2286495
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640533583
• Product: methionine sulfoxide reductase A
• Protein accession: YP_001218043
• Protein GI: 147673057
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0225] Peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00401] methionine-S-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 61
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGACA AACAAACCAT GGTTACGGCA CACAACGCCT TACCCGGTCG TACTACTGCG 
ATGTCGATTG ACGATACGCA TTTCGTCAAT GGCAGCTCAC TCACTGCTGC GCCCCAATCC 
GGTCAACAAC AAATCTTGAT TGGTATGGGC TGCTTTTGGG GCGCTGAACG CCTGTTTTGG 
CAACTGGATG GAGTGATCTC CACCTCCGTT GGCTACTCAG GCGGTTTTAC GCCCAATCCA 
ACCTATGAAG AAGTGTGCAG TGGAAAAACT GGCCATACCG AGGTCGTGCG CGTCATTTTT 
GATCCAGAAC GCCTGCCACT GACTGAACTG CTCCGCGCAT TTTGGGAGCG TCACGATCCC 
ACGCAAGGCA TGCGTCAAGG CAACGATCGC GGAACGCAAT ACCGCTCAGC CATTTACACT 
TTCAGTGAAG ATCAGCGCGA AATCGCAGAA GCCTCAAAAG CGGCTTATCA AGCCCTGCTG 
ACGGCGCAAC ATCGTCCCTC GATTACCACT GAGATTCTGC CCGCAGGAGC GTATTACTTC 
GCGGAGACGT ACCATCAGCA ATATCTGGCC AAAAATCCGA ATGGTTATTG TGGGCTAGGC 
GGTACAGGAG TCTGTTTCCC GCCACACTCC ACACTCTAA 

 

Protein sequence

MLDKQTMVTA HNALPGRTTA MSIDDTHFVN GSSLTAAPQS GQQQILIGMG CFWGAERLFW 
QLDGVISTSV GYSGGFTPNP TYEEVCSGKT GHTEVVRVIF DPERLPLTEL LRAFWERHDP 
TQGMRQGNDR GTQYRSAIYT FSEDQREIAE ASKAAYQALL TAQHRPSITT EILPAGAYYF 
AETYHQQYLA KNPNGYCGLG GTGVCFPPHS TL