Gene VC0395_A2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2124 
Symbol 
ID5135768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2279844 
End bp2280191 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content48% 
IMG OID640533580 
Producthypothetical protein 
Protein accessionYP_001218040 
Protein GI147675679 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCACC TCGTTTTTGT GTATGGCACT TTGCGTCATG GAGAGAGCAA CCACACGTAT 
TTACAACACA GTCAGTTGCT TGGTCAGTTT GAAACTAAAC CTGAATACGC CTTGTATGAT
CTAGGCGCGT ATCCCGGATT GGTGGAAGGG CATCAATCGG TGCATGGTGA AGTCTATCTC
GTGGATGAAC ACACTTTAGC GCAGCTAGAT ATTTTGGAAG ATGTGCCAGT GGAATATCGG
CGTGACACGA TTGAGACACC GTTTGGTACC GCGTGGATCT ATATTTATCA AGAGACCCAT
CGCTTACATT CGCTGATTGA TTCCGGAGAT TGGTGTCAGC GTGCCTAG
 
Protein sequence
MQHLVFVYGT LRHGESNHTY LQHSQLLGQF ETKPEYALYD LGAYPGLVEG HQSVHGEVYL 
VDEHTLAQLD ILEDVPVEYR RDTIETPFGT AWIYIYQETH RLHSLIDSGD WCQRA