| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2120 |
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| Symbol | ubiX |
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| ID | 5135855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2275768 |
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| End bp | 2276403 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640533576 |
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| Product | aromatic acid decarboxylase |
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| Protein accession | YP_001218036 |
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| Protein GI | 147673199 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGCATGA ACAACAATCG AACCATTACA CTGGCTTGGA CTGGCGCTTC CGGAGCGCCT
TACGGGCTGC GCTTATTGCA ATGCTTGTTA GCGGCAGACT ATCAGGTGTA CCTACTGATC
TCTTCGGCGG CGCGAGTGGT ACTGGCGACT GAGCACGGCT TGAAACTGCC CGCCAACCCT
GAAGCGGCGC AAGCGGCTTT GGTGAAGCAT CTGGGCTGCG CCAGTGATAA GTTGGTGGTG
TGTGGAAAAG AAGATTGGTT TTCGCCAGTG GCTTCCGGTT CGGCTGCCCC CAAGCAGATG
GTGGTGTGTC CATGCTCGGC AGGCAGTGTA GCCGCGATTG CTCATGGCAT GTCTGATAAT
CTGATTGAAC GCGCCGCTGA TGTGGTGCTG AAAGAGCGTG GACAACTGCT GTTGGTGGTG
CGTGAAACGC CATTCTCCAC TTTGCACTTA GAAAATATGC TTAAGCTCTC GCACATGGGG
GTGACTATCA TGCCTGCTGC GCCGGGTTTT TATCATCAGC CACAATCGAT TGACGATCTG
GTCGATTTTA TGGTGGCGCG CATTCTTGAT CATCTTGGCA TCGAACAAGC GCTCGTACCG
CGTTGGGGCT ATGATCAACG CGTGCGCGGC GAGTAA
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| Protein sequence | MSMNNNRTIT LAWTGASGAP YGLRLLQCLL AADYQVYLLI SSAARVVLAT EHGLKLPANP
EAAQAALVKH LGCASDKLVV CGKEDWFSPV ASGSAAPKQM VVCPCSAGSV AAIAHGMSDN
LIERAADVVL KERGQLLLVV RETPFSTLHL ENMLKLSHMG VTIMPAAPGF YHQPQSIDDL
VDFMVARILD HLGIEQALVP RWGYDQRVRG E
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