Gene VC0395_A2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2116 
Symbol 
ID5137804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2271499 
End bp2272080 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID640533572 
Producthypothetical protein 
Protein accessionYP_001218032 
Protein GI147673507 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA ATATGGCACG TAAAAACCAA AAAGCCCCTT GGGAAGAGGA AGAAGAGATC 
ATTTGGGTCA GTAGAACCGA AATGAAAAAT GACATGCTAG CCTTGCAAAA GCTCGGCGAA 
GAGCTGGTTG AATTAAAACC TTCCGCGTTA GCCAAATTCC CACTGCCAGA AGATCTGGCT 
GAAGCGATCA AAGATGCGCA GCGTTTTAAA AACGAAGCTC GTCGCCGCCA ACTGCAATAC 
ATTGGCAAAC TGATGCGCCA TATTGACCCA GAGCCACTGC AAGCGGCACT GGATAAGCTG 
CGTAACAAGC ACTCGCAAAC CACTGCATTA CTGCACAAAC TGGAGCAACT GCGTGATCGC 
ATCGTTGCCG AAGGGGATAG CGCGATTGAA GTGGCGATGG AGCAATACCC AGAAGCGGAT 
CGTCAACGTC TGCGTCTGTT AGCGCGTCAA GCCAGCAAAG AAAAAGCGGG CAACAAGCCG 
CCAAAATCGT CTCGCGAGAT CTTCCAACTG CTGAAAGAAG CGATGTTGGC AAAACAAGAG 
ATCGAAGAAG AGAGTGAAGA CGATCTGGAT TCAGCGGAAT AA
 
Protein sequence
MMKNMARKNQ KAPWEEEEEI IWVSRTEMKN DMLALQKLGE ELVELKPSAL AKFPLPEDLA 
EAIKDAQRFK NEARRRQLQY IGKLMRHIDP EPLQAALDKL RNKHSQTTAL LHKLEQLRDR 
IVAEGDSAIE VAMEQYPEAD RQRLRLLARQ ASKEKAGNKP PKSSREIFQL LKEAMLAKQE 
IEEESEDDLD SAE