Gene VC0395_A2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2104 
Symbol 
ID5135861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2261722 
End bp2262702 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content50% 
IMG OID640533560 
Producthypothetical protein 
Protein accessionYP_001218020 
Protein GI147674957 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATGC CCCATTCATT TGATTACCAA ACGGTCGCTA AACAAGTGCT AGCAACCGAA 
ATCCATGCAT TGCAACAGCT AGAGCAGTAC ATCAATGAGG ATTTTGCGCG TGCTTGTGCG
ATGATTTTGG CCAATCAAAC GGGCAAAGTC GTGGTGATGG GGATGGGCAA ATCAGGCCAC
ATTGGTAAGA AAATTGCCGC CACCTTAGCC AGTACAGGAA CGTCTGCCTT TTTTGTACAT
CCGGGTGAAG CTTCACATGG GGATCTCGGG ATGATTGAGC GTGGCGATAT CGTACTCGCC
ATCTCTAATT CCGGAGAATC ATCAGAAATC CTCGCCCTGC TTCCCGTGCT CAAGCGCTTG
AGTATTCGCG TGATCAGCAT GACAGGCAAC CCCAACTCTA ATATGGCGAA ATTAGCCGAT
ATCCATCTGC AAATCACCGT ACCGCGCGAA GCTTGCCCGT TAGAGCTTGC GCCAACCTCA
AGCACCACCG CCACTCTTGT AATGGGCGAT GCGTTGGCGG TGGCTCTGAT GCAAGCACGC
GGTTTCACCG CAGAAGATTT TGCTTTGTCT CACCCAGGTG GCGCACTTGG GCGTAAACTC
TTGCTCAAAC TCAATGACAT CATGCACAGT GGTGATGCAC TGCCTAAAGT GGCACCACAA
GCCTTGATCC GAGATGCTTT GCTCGAAATC AGTCAAAAAG GGCTTGGCAT GACAGCCATT
GTCGATGAAC AAGACACCCT ACTCGGTATT TTTACTGACG GTGATTTACG GCGCATTCTT
GATAAACGCA TCGATATTCA CAGCACTGTG ATTGCCGATG TGATGACGCG CCAACCAACC
GTTGCTCAGC CCAATTTGCT GGCCGTGGAA GGATTGAATT TAATGCAGGC CAAACGCATT
AATGGCCTGA TGCTCGTTGA AAATAATAAA TTGGTCGGTG CACTGAACAT GCACGATCTA
CTCAAAGCCG GAGTGATGTA A
 
Protein sequence
MRMPHSFDYQ TVAKQVLATE IHALQQLEQY INEDFARACA MILANQTGKV VVMGMGKSGH 
IGKKIAATLA STGTSAFFVH PGEASHGDLG MIERGDIVLA ISNSGESSEI LALLPVLKRL
SIRVISMTGN PNSNMAKLAD IHLQITVPRE ACPLELAPTS STTATLVMGD ALAVALMQAR
GFTAEDFALS HPGGALGRKL LLKLNDIMHS GDALPKVAPQ ALIRDALLEI SQKGLGMTAI
VDEQDTLLGI FTDGDLRRIL DKRIDIHSTV IADVMTRQPT VAQPNLLAVE GLNLMQAKRI
NGLMLVENNK LVGALNMHDL LKAGVM