| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2085 |
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| Symbol | valS |
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| ID | 5135624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2241866 |
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| End bp | 2244727 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533541 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001218001 |
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| Protein GI | 147674393 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000735472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CATACAACCC AACATCAATC GAACAAGATC TGTATAAGAC TTGGGAAGAG
CAAGGCTACT TTAAGCCTCA CGGTGACACA TCAAAAGACG CGTACAGCAT CATGATCCCG
CCACCGAACG TCACAGGCAG CCTGCACATG GGTCACGCCT TCCAAGACAC CATTATGGAT
ACTCTGATCC GCTGTCAGCG TATGAAGGGC AAAAATACCT TGTGGCAAGT GGGTACTGAC
CACGCGGGTA TCGCCACTCA AATGGTGGTT GAGCGTAAGA TCGCTGCAGA AGAAGGCAAA
ACTAAGCACG ATTACGGCCG TGATGCGTTC ATCGACAAGA TTTGGGAATG GAAAGCAGAA
TCTGGCGGTA CCATCACTAA GCAGCTACGT CGTCTTGGCG CCTCTGTCGA TTGGGATCGT
GAGCGCTTTA CGATGGATGA TGGCTTCTAC AAAGCCGTGC AAGAAGTGTT TGTGCGTCTC
TACAAAGATG ATTTGATCTA CCGCGGTAAG CGCCTAGTTA ACTGGGATCC AAAACTGCAC
ACTGCGATCT CCGATCTGGA AGTGGAAAAC AAAGAGACCA AAGGTCACAT GTGGCACTTC
CGCTACCCGC TGGCGGATGG CGTGAAAACG GCAGATGGTA AAGATTACAT CGTGGTTGCG
ACAACACGTC CAGAAACCAT GCTCGGCGAT ACTGGTGTTG CGGTTAACCC AGAAGATCCT
CGTTATAAAG ATCTGATTGG TAAAGAGATC ATTCTGCCGA TCGTCGGTCG TCGCATCCCT
ATCGTGGGCG ATGAGCACGC CGATATGGAG AAAGGCACGG GATGTGTGAA AATCACCCCT
GCGCACGACT TCAACGACTA TGAAGTCGGC AAGCGCCATA ACCTGCCGAT GATCAACATC
TTCACTTTTG ATGCCAACAT CCGTGATGTG GCAGAAGTGT TTAACACCAA AGGTGAAGCA
AGCGATGTTT ACAGCGGCGA ACTACCAGCG AAATACCAAG GCATGGAGCG TTTTGCTGCA
CGTAAAGCGA TCGTGGCGGA ATTTGAACAA CTGGGTCTAC TGCAAGAAAT CAAAGATCAC
GACTTAACGG TTCCTTACGG CGACCGTGGT GGTGTGGTGA TTGAACCAAT GCTGACTGAC
CAATGGTACG TTCGCGCTGG TATTCTGGCG AAACCAGCGG TTGAAGCCGT TGAGAATGGC
GATATTCAAT TTGTACCAAA ACAGTACGAG AACATGTACT TCTCTTGGAT GCGTGACATT
CAAGACTGGT GTATCTCTCG CCAACTGTGG TGGGGTCACC GCATTCCGGC TTGGTATGAC
GAGCAAGGCA ATGTGTTTGT AGGCCGTAAC GAAGAAGAAG TGCGTGCAGA AAACAACATC
GCGGCGGATG TTGCTCTTCG TCAAGATGAT GACGTGTTGG ATACTTGGTT CTCTTCTGCA
CTGTGGACCT TCGGAACACT AGGCTGGCCA GAAAAAACGC CTGAGCTGAA CGTATTCCAC
CCAACCGATG TTCTGGTAAC GGGTTTTGAC ATTATCTTCT TCTGGGTTGC GCGCATGATC
ATGATGACCA TGCACTTCTG TAAAGATGAA GATGGCAAAG CACAAGTTCC GTTCAAAACC
GTGTACGTAA CGGGTCTGAT CCGTGACGAA AACGGCGACA AGATGTCAAA ATCGAAAGGT
AACGTGCTTG ACCCTATCGA TATGATCGAC GGTATTGATC TAGAGTCTCT GGTCGCGAAG
CGCACCGGCA ACATGATGCA GCCACAACTG GCAGCGAAGA TCGAGAAAAA CACGCGTAAG
ACGTTTGAAA ACGGCATCGA AGCCTACGGT ACTGACTCAC TGCGTTTCAC TCTAGCGGCT
ATGGCTTCAA CCGGTCGTGA CATCAACTGG GATATGAAGC GTCTAGAAGG TTACCGTAAC
TTCTGTAACA AGCTGTGGAA CGCAAGCCGT TACGTGCTGA TGAACACCGA AGAGCAAGAT
TGCGGTTTTG CAGCCGGTGC TGAGCTTGAA TACTCGCTGG CCGACAAGTG GATCGAATCA
CAGTTCGAGC TGGCTGCGAA AGAGTTCAAT GGTCACATTG ATAACTTCCG TCTGGATATG
GCAGCCAACA CGCTGTACGA ATTCATCTGG AACCAATTCT GTGACTGGTA CTTAGAGCTG
ACTAAGCCGG TTCTTTGGAA AGGCACCGAA GCTCAGCAAC GCGCGACCCG TCGCACGCTG
ATCACCGTAC TAGAGAAAAC GCTGCGTTTG GCGCACCCAG TGATCCCTTA CATCACAGAA
ACCATCTGGC AAAGTGTTAA GCCACTGGTC GATGGCGTGG AAGGCGACAC CATCATGCTG
CAAGCACTAC CTCAGTACGA TGCGGCCAAC TTCAACCAAG AAGCCTTGGA TGATATTGAG
TGGGTGAAAG CCTTTATCAC TAGCATCCGT AACCTGCGCG CTGAGTACGA CATCAACCCA
GGTAAGCCTC TGGAAGTCAT GCTGAAAGCG GCGAATGAGC AAGATGCCGC GCGTATCGAA
GCGAACAAGC CAGTGCTGGT TTCACTGGCC AAGCTAGAAA GCATTCGTGT ATTGGCGGAT
GGCGAAGCGA CACCTGCGTG TGCAACAGCA CTGGTTGGTA AGTCTGAGCT GATGATCCCA
ATGGCAGGTC TGATTGATAA AGACGCTGAG CTGGATCGTC TGGCCAAAGA GATTGCTAAG
ACGCAAGGTG AAATTGCGCG TATCGAAGGC AAGCTAGGTA ACGAAGGTTT CGTGGCAAAA
GCACCAGAAG CGGTAATCAC CAAAGAGCGT GAAAAGCTCG CGGGTTACCA AGAAGCGCTG
GTGAAGCTTG AACAGCAGAA AGCGACCATC GCTGCGCTGT AA
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| Protein sequence | MEKTYNPTSI EQDLYKTWEE QGYFKPHGDT SKDAYSIMIP PPNVTGSLHM GHAFQDTIMD
TLIRCQRMKG KNTLWQVGTD HAGIATQMVV ERKIAAEEGK TKHDYGRDAF IDKIWEWKAE
SGGTITKQLR RLGASVDWDR ERFTMDDGFY KAVQEVFVRL YKDDLIYRGK RLVNWDPKLH
TAISDLEVEN KETKGHMWHF RYPLADGVKT ADGKDYIVVA TTRPETMLGD TGVAVNPEDP
RYKDLIGKEI ILPIVGRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHNLPMINI
FTFDANIRDV AEVFNTKGEA SDVYSGELPA KYQGMERFAA RKAIVAEFEQ LGLLQEIKDH
DLTVPYGDRG GVVIEPMLTD QWYVRAGILA KPAVEAVENG DIQFVPKQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD EQGNVFVGRN EEEVRAENNI AADVALRQDD DVLDTWFSSA
LWTFGTLGWP EKTPELNVFH PTDVLVTGFD IIFFWVARMI MMTMHFCKDE DGKAQVPFKT
VYVTGLIRDE NGDKMSKSKG NVLDPIDMID GIDLESLVAK RTGNMMQPQL AAKIEKNTRK
TFENGIEAYG TDSLRFTLAA MASTGRDINW DMKRLEGYRN FCNKLWNASR YVLMNTEEQD
CGFAAGAELE YSLADKWIES QFELAAKEFN GHIDNFRLDM AANTLYEFIW NQFCDWYLEL
TKPVLWKGTE AQQRATRRTL ITVLEKTLRL AHPVIPYITE TIWQSVKPLV DGVEGDTIML
QALPQYDAAN FNQEALDDIE WVKAFITSIR NLRAEYDINP GKPLEVMLKA ANEQDAARIE
ANKPVLVSLA KLESIRVLAD GEATPACATA LVGKSELMIP MAGLIDKDAE LDRLAKEIAK
TQGEIARIEG KLGNEGFVAK APEAVITKER EKLAGYQEAL VKLEQQKATI AAL
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