| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2078 |
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| Symbol | |
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| ID | 5135984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2235096 |
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| End bp | 2236349 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640533534 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217995 |
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| Protein GI | 147675731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000117952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAGCA TTAAAATCAC GGTAGATAGA TTGCAACCCG GGCTCTACAT TCGGTTGCCT
GTCAAATGGA ATGAACATCC CTTCCTATTC AATAGCTTTA AGATCAAATC ACAAGAGCAG
ATCCAACTGA TCAAGCATCT TGGTATTCAG CACGTTTTTC TCAATCCGGG ATTAAGCGAT
AGCCAGCCTT TACCGCCAAG CGTTGAAGAG GCAACTCCAG AAGAGGCTCT ACCTCCGGTT
GATAGTGAAG CGGAAAAGCT ATGGCAGGAA AAGCAAACAC GAATAGAGAA GCTCAACGAA
TATCGACGTC GAGTACAAAC TTGTGAGAAA GAGTTTGAAC GTTCTCTTGC TCGTATGCGT
GCGGTAGTGA ATAAAATTCG TAACCGCCCT TTAGATGCCG TCGGCGAAGC CATCATATTG
GTCGATGATA TCGTCGACAA ATTGCTGAGT GATGATAATG TCACCTTGCA TTTAATGAAC
AGCAAAAGTG AATTTGAAGA TATCTATTTT CACTCTTTAA ACGTGTCAGT CATTGCCATG
ATGATTGGTA AAGCGAGAGG CTTGCCTGCA GAAAGAATCA AAGAGTTGGC TTTTGCGGCG
CTATTTCATG ACATAGGCAA AGTGAGAGTG CCAACGGCGA TCGTACGTAA AAAGACCCCA
TTAACGGAAC CGGAAGAAAA CTACTTACGG CTGCATACCA AATACGGCAT AGAGTTGGCC
GATAATATAG AAACGTTTCC TGAAAGTGCT AAACGCGTCA TCGAACAACA TCACGAACTG
CGAGATGGTT CAGGCTATCC ACTCGGCCTA AAAGGGGATG ATATTGATGA GCTTGCGCAG
ATTGTGGCGG TAGCGAACGC GTTCGACAAT CTTTGCCACC CCAATATTCC TTCGGAACAA
AAGATCCCGT ACGTTGCTTT GTCTCATCTA TTTAAGAATT GTAAGCATCT TTATAACGCG
GAGAATTTAG GCATCTTAGT TAAGTTCATG GGGGTGTTCC CACCAGGAAC TGTCGTACAG
CTCTCTAATG ATATGGTGGG GTTAGTCATT TCAGTGAATG CAAGTAGCCT CTTGTATCCG
AATGTACTGA TTTATGATCC CTCAGTCCCG CGTTCTCAAG CGACGATAAT TGATCTTGCA
GACCGAGATC TGAAAATCGT CAATGCCATT TTACCGAACA AATTACCTGA TAAGGTTCGT
GATTATCTTA ACCCGCGTTC ACGGATCTCA TACTTCTTTG ACAGCGAAGA GTAA
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| Protein sequence | MASIKITVDR LQPGLYIRLP VKWNEHPFLF NSFKIKSQEQ IQLIKHLGIQ HVFLNPGLSD
SQPLPPSVEE ATPEEALPPV DSEAEKLWQE KQTRIEKLNE YRRRVQTCEK EFERSLARMR
AVVNKIRNRP LDAVGEAIIL VDDIVDKLLS DDNVTLHLMN SKSEFEDIYF HSLNVSVIAM
MIGKARGLPA ERIKELAFAA LFHDIGKVRV PTAIVRKKTP LTEPEENYLR LHTKYGIELA
DNIETFPESA KRVIEQHHEL RDGSGYPLGL KGDDIDELAQ IVAVANAFDN LCHPNIPSEQ
KIPYVALSHL FKNCKHLYNA ENLGILVKFM GVFPPGTVVQ LSNDMVGLVI SVNASSLLYP
NVLIYDPSVP RSQATIIDLA DRDLKIVNAI LPNKLPDKVR DYLNPRSRIS YFFDSEE
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