Gene VC0395_A2072 details

Gene Information

• Locus tag: VC0395_A2072
• Symbol: rrlB
• ID: 5135807
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2229660
• End bp: 2232546
• Gene Length: 2887 bp
• GC content: 52%
• IMG OID: 640533529
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.470715
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTAAGTGAC TAAGCGTACA CGGTGGATGC CTGGGCAGTC AGAGGCGATG AAGGACGTAC 
TAACTTGCGA TAAGCGCAGA TAAGGCAGTA AGAGCCGTTT GAGTCTGCGA TTTCCGAATG 
GGGAAACCCA ACTGCATAAG CAGTTACTGT TAACTGAATA CATAGGTTAA CAGAGCAAAC 
CGGGGGAACT GAAACATCTA AGTACCCCGA GGAGAAGAAA TCAACCGAGA TTCCGGTAGT 
AGCGGCGAGC GAACCTGGAT TAGCCCTTAA GCACTCGGTG AAGTAGGTGA ACAAGCTGGA 
AAGCTTGGCG ATACAGGGTG ATAGCCCCGT AACCGACGCT TCATCGAGCG TGAAATCGAG 
TAGGGCGGGA CACGTGATAT CCTGTCTGAA TATGGGGGGA CCATCCTCCA AGGCTAAATA 
CTCCTGACTG ACCGATAGTG AACCAGTACC GTGAGGGAAA GGCGAAAAGA ACCCCTGTGA 
GGGGAGTGAA ATAGAACCTG AAACCGTGTA CGTACAAGCA GTAGGAGCAC CTTCGTGGTG 
TGACTGCGTA CCTTTTGTAT AATGGGTCAG CGACTTATAT TCAGTGGCAA GGTTAACCGT 
ATAGGGGAGC CGTAGCGAAA GCGAGTCTTA ACTGGGCGCT CAGTCTCTGG ATATAGACCC 
GAAACCGGGT GATCTAGCCA TGGGCAGGTT GAAGGTTGAG TAACATCAAC TGGAGGACCG 
AACCGACTAA TGTTGAAAAA TTAGCGGATG ACTTGTGGCT AGGGGTGAAA GGCCAATCAA 
ACTCGGAGAT AGCTGGTTCT CCCCGAAAGC TATTTAGGTA GCGCCTCGGA CGAATACTAC 
TGGGGGTAGA GCACTGTTAA GGCTAGGGGG TCATCCCGAC TTACCAACCC TTTGCAAACT 
CCGAATACCA GTAAGTACTA TCCGGGAGAC ACACGGCGGG TGCTAACGTC CGTCGTGGAG 
AGGGAAACAA CCCAGACCGC CAGCTAAGGT CCCAAAGTAT TGCTAAGTGG GAAACGATGT 
GGGAAGGCTC AGACAGCTAG GATGTTGGCT TAGAAGCAGC CATCATTTAA AGAAAGCGTA 
ATAGCTCACT AGTCGAGTCG GCCTGCGCGG AAGATGTAAC GGGGCTAAGC AATACACCGA 
AGCTGCGGCA ATGTCTTTTA GACATTGGGT AGGGGAGCGT TCTGTAAGCC GTTGAAGGTG 
AATCGTAAGG TTTGCTGGAG GTATCAGAAG TGCGAATGCT GACATGAGTA ACGACAAAGG 
GGGTGAAAAA CCTCCTCGCC GGAAGACCAA GGGTTCCTGT CCAACGTTAA TCGGGGCAGG 
GTGAGTCGAC CCCTAAGGTG AGGCCGAAAG GCGTAATCGA TGGGAAACGG GTTAATATTC 
CCGTACTTCT GACTATTGCG ATGGGGGGAC GGAGAAGGCT AGGTGGGCCA GGCGACGGTT 
GTCCTGGTTC AAGTGCGTAG GCTTGAGAGT TAGGTAAATC CGGCTCTCTC TAAGGCTGAG 
ACACGACGTC GAGCTACTAC GGTAGTGAAG TCATTGATGC CATGCTTCCA GGAAAAGCCT 
CTAAGCTTCA GATAGTCAGG AATCGTACCC CAAACCGACA CAGGTGGTCG GGTAGAGAAT 
ACCAAGGCGC TTGAGAGAAC TCGGGTGAAG GAACTAGGCA AAATGGTACC GTAACTTCGG 
GAGAAGGTAC GCTCTTGATG GTGAAGTCCC TCGCGGATGG AGCTGACGAG AGTCGCAGAT 
ACCAGGTGGC TGCAACTGTT TATTAAAAAC ACAGCACTGT GCAAAATCGC AAGATGACGT 
ATACGGTGTG ACGCCTGCCC GGTGCCGGAA GGTTAATTGA TGGGGTTAGC GCAAGCGAAG 
CTCTTGATCG AAGCCCCGGT AAACGGCGGC CGTAACTATA ACGGTCCTAA GGTAGCGAAA 
TTCCTTGTCG GGTAAGTTCC GACCTGCACG AATGGCGTAA TGATGGCCAC GCTGTCTCCA 
CCCGAGACTC AGTGAAATTG AAATCGCTGT GAAGATGCAG TGTACCCGCG GCTAGACGGA 
AAGACCCCGT GAACCTTTAC TACAGCTTGG CACTGAACAT TGAACCTACA TGTGTAGGAT 
AGGTGGGAGG CTATGAAGAC GTGACGCCAG TTGCGTTGGA GCCGTCCTTG AAATACCACC 
CTTGTATGTT TGATGTTCTA ACTTAGACCC GTTATCCGGG TTGAGGACAG TGCCTGGTGG 
GTAGTTTGAC TGGGGCGGTC TCCTCCCAAA GAGTAACGGA GGAGCACGAA GGTGGGCTAA 
TCACGGTTGG ACATCGTGAG GTTAGTGCAA TGGCATAAGC CCGCTTAACT GCGAGAATGA 
CGGTTCGAGC AGGTGCGAAA GCAGGTCATA GTGATCCGGT GGTTCTGTAT GGAAGGGCCA 
TCGCTCAACG GATAAAAGGT ACTCCGGGGA TAACAGGCTG ATACCGCCCA AGAGTTCATA 
TCGACGGCGG TGTTTGGCAC CTCGATGTCG GCTCATCACA TCCTGGGGCT GAAGTCGGTC 
CCAAGGGTAT GGCTGTTCGC CATTTAAAGT GGTACGCGAG CTGGGTTTAG AACGTCGTGA 
GACAGTTCGG TCCCTATCTG CCGTGGGCGT TGGAAGATTG AAGGGGGCTG CTCCTAGTAC 
GAGAGGACCG GAGTGGACGA ACCTCTGGTG TTCGGGTTGT GTCGCCAGAC GCATTGCCCG 
GTAGCTAAGT TCGGAATTGA TAAGCGCTGA AAGCATCTAA GCGCGAAGCG AGCCCTGAGA 
TGAGTCTTCC CTGACAGTTT AACTGTCCTA AAGGGTTGTT CGAGACTAGA ACGTTGATAG 
GCAGGGTGTG TAAGCGTTGT GAGGCGTTGA GCTAACCTGT ACTAATTGCC CGTGAGGCTT 
AACCATA 

 

Protein sequence