Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2067 |
Symbol | leuC |
ID | 5135145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2226162 |
End bp | 2227565 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533524 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001217991 |
Protein GI | 147674703 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG CCAAAACTCT TTACGAAAAA ATTTACGATG CCCATGTGGT GGTGGCCGCA CCGGGTGAAA CGCCGATTCT GTACATCGAT CGTCATCTAG TCCATGAAGT GACCTCTCCA CAAGCCTTTG ATGGCTTGCG TGAAAAAGGT CGCCCGGTAC GCCAAGTTAG CAAAACTTTT GCGACCATGG ATCACAACGT CTCCACCACT ACTAAAGACA TCAATGCCTC AGGTGAAATG GCGCGCATCC AGATGCAAAC GCTTTCCAAA AACTGCGAAG AGTTTGGCGT CACGCTGTAC GACATTAACC ACAAGTACCA AGGCATTGTG CATGTGATGG GACCTGAGCT TGGTATTACC CTCCCCGGCA TGACGATTGT ATGTGGTGAT TCACACACCG CAACTCACGG TGCATTCGGC TCGCTTGCCT TTGGGATAGG CACCTCAGAA GTAGAACACG TACTGGCTAC CCAAACCCTA AAGCAAGGCC GCGCTAAGAC GATGAAAATC GAAGTGCGGG GCAAAGTGGC TCCCGGCATC ACCGCTAAAG ACATCGTACT GGCGATCATT GGTAAAACAA CTGCCGCTGG CGGTACAGGC TATGTCGTGG AATTTTGTGG AGAAGCGATT CGCGATCTCT CCATGGAAGG TCGCATGACC GTGTGTAACA TGGCGATTGA ACTTGGTGCG AAAGCAGGCT TGATTGCCCC TGATGCAACT ACATTCAACT ACATCAAAGG CCGCAAGTTT GCCCCACAAG GCAGTGATTG GGATGCTGCT GTCGACTATT GGCAAACATT AAAAACCGAT GAGGATGCAC AGTTCGATGC CGTCGTGACG CTTGAAGCCA GTGAAATCAA ACCGCAAGTG ACTTGGGGTA CCAACCCAGG CCAAGTGATT GCCGTTGATG AGCCAATCCC ATCACCTAGC CAGTTTGCCG ATCCTGTTGA ACGCAGCTCA GCAGAAAAAG CTCTGGCTTA CATGGGACTT GAAGCCGGCA AAATGCTCTC CGATTATAAG GTCGATAAAG TGTTCGTCGG TTCATGCACC AACTCGCGCA TCGAAGATAT GCGCGCTGCG GCAGCGGTAG CCAAAGGGAA AAAAGTCGCC TCTCATGTCC AAGCATTGAT CGTGCCCGGA TCCGAACAAG TGAAAGCGCA AGCCGAAGCG GAAGGCTTAG ATAAGATCTT TATTGAAGCA GGATTTGAAT GGCGCTTACC GGGTTGCTCA ATGTGTTTAG CCATGAACAA TGACCGCTTA GGGCCAGGAG AACGCTGCGC GTCTACCTCA AACCGCAACT TTGAGGGACG TCAGGGACGT GATGGTCGCA CTCATTTAGT TAGCCCAGCA ATGGCAGCCG CTGCAGCGAT TGCTGGTCAC TTCGTCGATA TTCGTCAGTT TTAA
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Protein sequence | MSKAKTLYEK IYDAHVVVAA PGETPILYID RHLVHEVTSP QAFDGLREKG RPVRQVSKTF ATMDHNVSTT TKDINASGEM ARIQMQTLSK NCEEFGVTLY DINHKYQGIV HVMGPELGIT LPGMTIVCGD SHTATHGAFG SLAFGIGTSE VEHVLATQTL KQGRAKTMKI EVRGKVAPGI TAKDIVLAII GKTTAAGGTG YVVEFCGEAI RDLSMEGRMT VCNMAIELGA KAGLIAPDAT TFNYIKGRKF APQGSDWDAA VDYWQTLKTD EDAQFDAVVT LEASEIKPQV TWGTNPGQVI AVDEPIPSPS QFADPVERSS AEKALAYMGL EAGKMLSDYK VDKVFVGSCT NSRIEDMRAA AAVAKGKKVA SHVQALIVPG SEQVKAQAEA EGLDKIFIEA GFEWRLPGCS MCLAMNNDRL GPGERCASTS NRNFEGRQGR DGRTHLVSPA MAAAAAIAGH FVDIRQF
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