| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2060 |
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| Symbol | |
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| ID | 5136490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2217338 |
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| End bp | 2219143 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533517 |
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| Product | putative long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001217984 |
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| Protein GI | 147675212 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACT TAGATTTCCA CATCGTTAAA CGGATCCGCC AACGTATTGC CCAAGGGGGT
GATAACGCCG CGCTAAAACA TAAACAAAAC GGCCAATGGC AAGCAATCAA TTGGCACCAG
TTTGGTGAAC AATTGGATGA ACTCTCGATG GCGTTGTTAG CTCAAGGCAT CGGTGTACAG
GACAAAATTG CGATTTTTTC CAACAACATG CCACGTTGGA CGATTGCTGA TTTTGCCGCC
TTACAGATCC GTGCGGTAAC GGTTCCTATC TATCCTACCA ATACGCCAGA GCAGGCGGCT
TACATCTTAC AGAATGCGGA TGTGAAAGTG GTTTTTGTGG GTGAGCAGGC ACAATTTGAT
GCTGCACTCA GCCAATTTGA ACAATGCCCA GAGCTGCGTC TGATTGTGGC TATGAATGCC
AATATCGACC TCAAACAAGC CAGTTGTGCG ATGCATTGGG ATGAGTTTGT TGCTCAAAGT
CACCATCAAG ATCGAGCGCC GTTGGATGCC TTAATTGAGC AGGCCAACTA TGACGATCTG
TTTACCCTCA TTTATACCTC CGGCACTACC GGAACGCCGA AAGGGGTGAT GCTGGATTAT
CGTAATATCG GTGCTCAGCT AGAGGGACAC GATCAGCGCC TGAATCTGAC TCAAGAGGAT
GTCTCACTCT GTTTCCTGCC ACTTTCTCAT GTCTTTGAGC GAGCATGGAC GGCGTATGTG
CTTTATAAAG GTGCGACCAA CTGTTACTTG CAGGACGTGG CTCATGTGCG TGAAGCTTTA
GCTGAAGTCC GTCCAACCGT GATGTGTGCC GTACCGCGCT TTTATGAAAA GATCTTCTCA
GCAATCCATG AAAAAGTCGT TAAAGCGCCG TTGGTACGCA AGGTTCTTTT TACTTGGGCT
GTCAATATGG GGGCGAAAAT GGCGGTGTGC CGTCAGCAGC AGCGCCAACC TTCTTGGATG
CTTAAACAGA GCCATCAATT CGCTGACAAG CTGGTGTTAA GTAAGCTGCG CGCTTTGCTT
GGGGGAAGAA TCAATTTCAT GCCTTGTGGT GGCGCTAAGT TGGATGAAAC CATTGGCCGC
TTTTTCCATG CGATTGGTAT TAACGTCAAG CTTGGTTATG GCATGACCGA AACCACGGCC
ACGGTTTCTT GTTGGGATGA CCACTGTTTT AACCCAGATT CGATTGGGCT TTCTATGCCG
GGAGCTCAAG TCAAAATTGG CGAGAACAAT GAAATTCTGG TTCGTGGTCC TATGGTGATG
CGTGGCTACT ACAAGCTCGA TAAAGAAACC ACCGAAAGTT TTGATGAGCA GGGTTTTCTG
AAAACGGGTG ATGCGGGTCA TATTGATGAA AATGGTAATT TATTTATTAC CGATCGCATC
AAGGAACTGA TGAAAACCTC AGGTGGTAAA TATATTGCGC CGCAGGTGAT TGAAGGGGCG
ATTGGTAAAG ATCATTTCAT AGAACAGATC GCGGTGATTG CCGATACGCG CAAGTTTGTC
TCGGCTTTGA TTGTGCCTTG CTTTGATTCA TTGGAAGAGT ATGCCAAAGA ACTGAACATT
AAATATCATG ACCGTCTGGA GCTTATCAAA CATAGCCAAG TACTGGAGAT GTTTGAAAAG
CGCGTTAATG AGTTACAAAA AGAGCTGGCG AAATTTGAAC AAGTGAAGAA GTTTAGATTG
TTGCCAAAAG CATTTTCGAT GGACAGTGGT GAGCTGACAC CGACCCAAAA ACTGCGTCGT
AAAGTGATTA ACGATCGCTA TCAGGATGAA ATCGAAGAAA TGTACCAAGA TTCTCCGAAA
AAATAG
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| Protein sequence | MTNLDFHIVK RIRQRIAQGG DNAALKHKQN GQWQAINWHQ FGEQLDELSM ALLAQGIGVQ
DKIAIFSNNM PRWTIADFAA LQIRAVTVPI YPTNTPEQAA YILQNADVKV VFVGEQAQFD
AALSQFEQCP ELRLIVAMNA NIDLKQASCA MHWDEFVAQS HHQDRAPLDA LIEQANYDDL
FTLIYTSGTT GTPKGVMLDY RNIGAQLEGH DQRLNLTQED VSLCFLPLSH VFERAWTAYV
LYKGATNCYL QDVAHVREAL AEVRPTVMCA VPRFYEKIFS AIHEKVVKAP LVRKVLFTWA
VNMGAKMAVC RQQQRQPSWM LKQSHQFADK LVLSKLRALL GGRINFMPCG GAKLDETIGR
FFHAIGINVK LGYGMTETTA TVSCWDDHCF NPDSIGLSMP GAQVKIGENN EILVRGPMVM
RGYYKLDKET TESFDEQGFL KTGDAGHIDE NGNLFITDRI KELMKTSGGK YIAPQVIEGA
IGKDHFIEQI AVIADTRKFV SALIVPCFDS LEEYAKELNI KYHDRLELIK HSQVLEMFEK
RVNELQKELA KFEQVKKFRL LPKAFSMDSG ELTPTQKLRR KVINDRYQDE IEEMYQDSPK
K
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