| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2057 |
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| Symbol | serA |
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| ID | 5136407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2213175 |
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| End bp | 2214404 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533514 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001217981 |
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| Protein GI | 147673205 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0912735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG TTTCACTGGA AAAAGACAGA ATTAAGATCC TCCTTCTTGA AGGACTTCAC
CCCTCTTCGG TGGAAGTTTT GCAAGCGGCC GGTTACAGCA ATATCGAATA CCATAAAGGC
TCGCTGGAAG AAGCTGAGCT GATTAAAGCT ATCAAAGATG TGCATTTTGT CGGGATCCGC
TCGCGCAGTA ATCTGACGGA GAAAGTGATC AATGCGGCAG AGAAACTGGT GGCGATTGGC
TGTTTCTGTA TCGGTACTAA CCAAGTCGAC CTTAATGCCG CCGCCAAACG CGGTATTCCA
GTGTTTAACG CACCATTCTC CAATACTCGC AGTGTGGCGG AACTGGTGCT CGGCGAAATT
TTACTGTTAC TGCGTGGCAT TCCAGAGAAA AACGCACTTG CTCACCGTGG GATCTGGAAA
AAAAGTGCAG ATAACTCTTA TGAAGCACGG GGTAAACGCC TAGGCATTAT CGGTTACGGT
CATATCGGTA CTCAGTTGGG GATCATTGCT GAAAACTTGG GGATGCACGT ATATTTCTAT
GACATTGAAA GCAAACTCTC GCTCGGTAAC GCTACCCAAG TACATACCTT AAGCGAGCTA
CTCAATAAGT GTGATGTCAT ATCACTGCAT GTTCCGGAAA CCGCTGGCAC TAAAAATATG
ATGGGTGCGG AAGAGTTTGC GCGCATGAAA CCGGGTGCTA TCTTCATTAA CGCCGCCCGC
GGTACTGTGG TCGATATCCC GGCTCTGTGC AATGCGCTCG AATCTGGTCA TATTGCAGGG
GCAGCGATTG ACGTATTCCC AGAAGAACCG GCATCAAACA AAGAGCCGTT TGAATCGCCA
CTGATGAAGT TTGATAACGT GATTTTGACA CCACACGTGG GGGGGTCAAC CCAAGAGGCA
CAAGAGAACA TTGGCATTGA AGTGGCTGGC AAGCTGGCTA AATACTCAGA TAACGGCTCA
ACGCTCTCTA GTGTCAACTT CCCTGAAGTG TCACTGCCAG AGCATCGCAG CTGCTCTCGC
TTACTGCATA TTCACGCCAA CCGTCCGGGC ATTTTGACCC AAATTAACAC CATCTTCGCC
GAAGAAGGGA TCAACATCGC GGCTCAATAT CTGCAAACCA CCGCAGAAAT CGGCTATGTG
GTCATCGATG TGGAAACGGC TCGCTCTGAA GAAGCGTTAA CTAAGCTTAA AGCGATCGAC
GGCACGATTC GCGCCCGTAT TCTGCACTGA
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| Protein sequence | MAKVSLEKDR IKILLLEGLH PSSVEVLQAA GYSNIEYHKG SLEEAELIKA IKDVHFVGIR
SRSNLTEKVI NAAEKLVAIG CFCIGTNQVD LNAAAKRGIP VFNAPFSNTR SVAELVLGEI
LLLLRGIPEK NALAHRGIWK KSADNSYEAR GKRLGIIGYG HIGTQLGIIA ENLGMHVYFY
DIESKLSLGN ATQVHTLSEL LNKCDVISLH VPETAGTKNM MGAEEFARMK PGAIFINAAR
GTVVDIPALC NALESGHIAG AAIDVFPEEP ASNKEPFESP LMKFDNVILT PHVGGSTQEA
QENIGIEVAG KLAKYSDNGS TLSSVNFPEV SLPEHRSCSR LLHIHANRPG ILTQINTIFA
EEGINIAAQY LQTTAEIGYV VIDVETARSE EALTKLKAID GTIRARILH
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