| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2046 |
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| Symbol | nadB |
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| ID | 5136614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2203380 |
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| End bp | 2205032 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533503 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_001217970 |
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| Protein GI | 147674681 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTT GGATGACTCG CTACAGTTTG GGAATTGGCA ATTTTATGAA TGCAGACCGA
GAGCATCAAT GTGATGTATT AGTCATAGGA AGTGGCGCAG CAGGCTTATC GCTTGCTTTA
CAGGTCGCTC AATACGGAAA AGTGATTGTA TTAAGCAAAG GGCCGCGCAG TGAAGGCGCG
ACTTTTTATG CACAAGGCGG TATTGCAGCA GTCTTTGATG AATCGGACAG TATTGAATCG
CATGTGCAGG ACACCTTAAT TGCAGGTGCT GGGATTTGTG ATGAACAAAC CGTGCGCTTT
ATTGCCGAGC ATGCCAAAGA GTGCGTGCAG TGGCTGATTG ATGGCGGTGT ACCTTTTGAC
AAAGAAGAGG ACAGCGATAA CGACCACCCA CGCTACCACT TGACCCGCGA AGGCGGTCAC
AGCCATCGCC GTATTTTGCA CGCTGCCGAT GCCACAGGGA TGGCAATGCA GACGTCCTTG
CAAGATAACG CCCACAACCA TCCCAACATT ACGGTACTTG AAAGACACAA TGCGCTGGAT
TTGATCACTG AAGATAAAAT CGGCGGTGAT GCCAACAAAG TCGTTGGCGC CTATGTATGG
AATCGTAATG CGGAACACGT AGAAACGATT CGCGCCAAAT TTGTGGTGTT GGCGACTGGC
GGGGCATCTA AGGTGTATCA GTACACCTCT AACCCTGATG TTTCTTCTGG TGATGGCATT
GCCATGGCGT GGCGTGCGGG CTGCCGTGTG GCCAACCTAG AGTTCAACCA GTTCCACCCA
ACCTGTTTAT ACCATCCAGA AGCACGTAAC TTCCTACTTA CCGAAGCGCT GCGTGGTGAA
GGCGCTTATT TGCGCCGCCC AGATGGCAGC CGCTTTATGC CGGATTTCGA TGAACGAGCT
GAGCTGGCTC CGCGTGATAT CGTGGCACGC GCGATCGACT TTGAAATGAA GCGTTTAGGC
GCGGACTGTA TGTATCTCGA CATCAGCCAT AAGCCTGCTG ACTTTATCGA AAAACACTTC
CCCACCATTT ACTCACGCTT GATGGATTTG GGCATTGATA TGACCAAAGA ACCGATCCCC
ATCGTTCCTG CGGCGCACTA TACGTGTGGT GGCGTGATGG TGAATCCGCA AGGTCAAACG
GATCTTAAGC AGTTGTATGC GATTGGCGAA GTGAGCTACA CCGGCTTACA CGGCGCAAAC
CGTATGGCCT CAAACTCTCT TCTAGAATGC GTGGTATACG CATGGTCAGC GTCACAAGAC
ATCATTGCTC AGTTGCCCAA CGCAAGCATG CCAGAGTCAC TCCCAGCTTG GGATGAAAGC
CAAGTCACCT GTTCTGATGA GGAAGTGGTT TTGCAGCATA ACTGGCACGA ACTGCGCCTC
TTTATGTGGG ACTACATGGG AATCGTGCGC ACCAACAAGC GTTTGGAACG AGCAATGCGC
CGCATTCAGC TACTGCAACA GGAGACCCAC GAGTATTACA GCAACTTCCG TGTGTCAAAC
AACCTCCTTG AGATGCGTAA CTTACTGCAA GTCGCTGAAT TGATGGTGCG TTGCGCGATG
CAACGCAAAG AAAGTCGCGG CTTACACTAC ACGTTGGACT ATCCAGATCA ACTGGCAGAG
AGTGGCCCAA CGATTCTTGT GCCGGAAAAA TAA
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| Protein sequence | MSSWMTRYSL GIGNFMNADR EHQCDVLVIG SGAAGLSLAL QVAQYGKVIV LSKGPRSEGA
TFYAQGGIAA VFDESDSIES HVQDTLIAGA GICDEQTVRF IAEHAKECVQ WLIDGGVPFD
KEEDSDNDHP RYHLTREGGH SHRRILHAAD ATGMAMQTSL QDNAHNHPNI TVLERHNALD
LITEDKIGGD ANKVVGAYVW NRNAEHVETI RAKFVVLATG GASKVYQYTS NPDVSSGDGI
AMAWRAGCRV ANLEFNQFHP TCLYHPEARN FLLTEALRGE GAYLRRPDGS RFMPDFDERA
ELAPRDIVAR AIDFEMKRLG ADCMYLDISH KPADFIEKHF PTIYSRLMDL GIDMTKEPIP
IVPAAHYTCG GVMVNPQGQT DLKQLYAIGE VSYTGLHGAN RMASNSLLEC VVYAWSASQD
IIAQLPNASM PESLPAWDES QVTCSDEEVV LQHNWHELRL FMWDYMGIVR TNKRLERAMR
RIQLLQQETH EYYSNFRVSN NLLEMRNLLQ VAELMVRCAM QRKESRGLHY TLDYPDQLAE
SGPTILVPEK
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