Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2043 |
Symbol | rseB |
ID | 5135571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2200748 |
End bp | 2201698 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533500 |
Product | periplasmic negative regulator of sigmaE |
Protein accession | YP_001217967 |
Protein GI | 147674099 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC TTTTGATCAG TGCGCTGACA CTGTTCTGTG TAAATTCAAC TACCGCCTTT GCAGAGGCGT TGTTGTATCA GATGAATGAA GCCAGCCAAC ATCTCAATTA CGAACTCTCA TACATCTTGG TTAAGAAAAA CAGCATTGAG CCCTTGTTGT ATCGTCATGC TCGGCAAGAT GATCAACAAC TGGCGCATTT GGTGTACTTG AGCGGCCCCG TGCGTGAAGT GATCCGCCGT GGTGATGAAG TGAGTTACAT CGAGCCGGGT GTCGAGCCTT TTACGATTGA ATCGGGCAAT ATGGTGGCTC CAACCATCCC CATGTTGCAC ACGGATGTGG CGGAGTTGAG CCGCTACTAT GACTTCGTGA AAGTCGGGCG CGCCCGTGAA GCGGGGGCAG CGTGCCAAGT ACTGCGCGTG GTTCCGAAAG ATGGTTTACG CTACTCGTAT GTTGTCTGGG TCGATGAAAA AAGCCATTTG CCTTTAAGGG CGGATTTGCT GGATCGCGAT GGCGAAGTGC TTGAGCAGTA TCGCACCATT TCATTTTCGG TCAGCGAGCG TTTGGCCGAA ATCATGGCAG GGCTAAACAA GGTGCAACTG CCTGAAGTCC TTAAGTTGCC AAAAGGCAGT GTGCAAGAGA CCTTCTGGCA AGTCACTTGG GTTCCGGATG GTTTTCAAGC CATGGAGCTG AATCGTTATC GTATGGCAAT GACAGAGCGT TTGGTGGAAA GCCAGATGTA TTCGGACGGC CTGTTTAATT TCTCAGTGTA TGTCTCTGCC AGTGATAACT ACTCACTCAA AGGTCAGTTG GTTCGACAAG GCCGCCGTAC TTTGCACAGT GTCGTCAAAG GTGAGAATGA AATTTCGGTA GTGGGCGATA TTCCTCCTGC GACTGCGCAA CGTATCGCTC AATCGGTGAT GTTTGGTGTC GGTGGAGTGA AAGCGCAATG A
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Protein sequence | MKKLLISALT LFCVNSTTAF AEALLYQMNE ASQHLNYELS YILVKKNSIE PLLYRHARQD DQQLAHLVYL SGPVREVIRR GDEVSYIEPG VEPFTIESGN MVAPTIPMLH TDVAELSRYY DFVKVGRARE AGAACQVLRV VPKDGLRYSY VVWVDEKSHL PLRADLLDRD GEVLEQYRTI SFSVSERLAE IMAGLNKVQL PEVLKLPKGS VQETFWQVTW VPDGFQAMEL NRYRMAMTER LVESQMYSDG LFNFSVYVSA SDNYSLKGQL VRQGRRTLHS VVKGENEISV VGDIPPATAQ RIAQSVMFGV GGVKAQ
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