| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2037 |
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| Symbol | recO |
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| ID | 5137028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2194916 |
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| End bp | 2195641 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533494 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001217961 |
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| Protein GI | 147673381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGACG GACTGCAACG CTGTTTTGTT CTGCACCGCC GCCCTTACAG TGAATCGAGC
TTAATTCTCG ATGTGTTCAG TGAGGAGTAC GGTCGAGTCA CATTAATGGC CAAAGGTGCG
CGCGGAAAAC GCTCCAACCT CAAAGGTGCG CTACAACCTT TCACTCCTTT ACTGCTGAAA
TGGTCGGGCA ATGGCTCGAT GAAAACCTTA CGCCAAGCCG AACCAATTAG TCTCGGTTTA
CCGCTTTCTG GCGTCTATCT CTATTCTGCT ATGTACATCA ACGAGCTGGT GGATCGGGTG
TTAATGCCAG AAGTCGCTAG TCCTGGGCTA TTTCATGATT ATCTGTTTGC GCTCACTGAA
CTGGCGCAAA GCACCAATCC AGAGCCAGCG CTACGCCGCT TTGAACTCGC TTTGCTTGCT
GCGATGGGCT ACGGCGTCGA TTTTCTGCAT TGTGCGGGAA CGGGCGAGCC AGTTTCACCT
GACATGACTT ACCGTTATCG TGAACAAAAG GGCTTTATCG CTTCGGTACG TCGCGATAAT
CTCACTTTTC TTGGTAATGA GTTGATTGCG ATCAGCGAGC GGCGTTTTAC CAGCAAAGAA
CAACTGCAAG CGGCAAAACG CTTTACACGT TTAGCCTTAA AGCCGTATCT TGGCGGCAAA
CCTTTAAAGA GTCGTGAGTT GTTTCGTCAA ACAACTCTAC CTAGAGCACG GAGTACAGAA
GAATGA
|
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| Protein sequence | MSDGLQRCFV LHRRPYSESS LILDVFSEEY GRVTLMAKGA RGKRSNLKGA LQPFTPLLLK
WSGNGSMKTL RQAEPISLGL PLSGVYLYSA MYINELVDRV LMPEVASPGL FHDYLFALTE
LAQSTNPEPA LRRFELALLA AMGYGVDFLH CAGTGEPVSP DMTYRYREQK GFIASVRRDN
LTFLGNELIA ISERRFTSKE QLQAAKRFTR LALKPYLGGK PLKSRELFRQ TTLPRARSTE
E
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