Gene VC0395_A2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2034 
Symbol 
ID5137386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2192255 
End bp2193601 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content50% 
IMG OID640533491 
Producthypothetical protein 
Protein accessionYP_001217958 
Protein GI147674675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGTGCA GGTTGGCGCC GTGGTGGAAA TCGCGCTTGC TTAGGGATAA CCCAATGATA 
CGAAGCCTTT TTCAAACACG CCTGATGAGC GGTGTTGTCG GTCTATTAGC CATGACGAGC
GGTGCTGCCT TAGCGGCCGA CTGGAGCGTT TCTGGTTATG GTTCGATTGG TTATAGCTAT
GAAAATGAAG AGAATCTCGG TTTCCTGCGC AACATCGCTC AGCCAGATGA TTATCAACGC
AACGGATCGT TTAAGCCAGA TAGCAATATT GGGGTTCAGT TTGATCTGCA GTTAGATCCG
CAATGGTCGG TGACCACTCA GTGGGTAATG AAAGAGCGAG TCGAGCAGCG CTTCGATGAT
ATTACTGAGC TGGCTTTTGT GCGTTATACG CCGGATGAAA ATTGGGATAT TCGCCTAGGG
CGCCTTGGGC TTAACGCCTA TATCGCCGCT GACAGCCGAC GGATTGACTA CGCCCACCTT
TGGTTACGCC CTCCCCAAGA GTTTTATGGC GGCATTTTCT ATGATGCCAT CGATGGGATT
GATGTCACTT ATCGCAGCCA ATGGGATGAG ATCACTTGGT CGTTAGGCGC GCAATATGGC
CGAATTAAAC AGAAACTGCA AAATACCGCT TCCAGCGAAA TTTCTGCCAC GCAATCCGAT
CAAACATTAG CTTTGGTGTT TTCACTCGAA CAGGATCGTT GGTTTGGACG CCTCTCCTAT
GTGCATGTCG GGCAACTGAA GGTGGATCTA GACGGTAATT CTCTACTGGG TATTCAAGTC
GTCAATCAAC TGGCGCAAGC CGGGCTTGGC CCGATCAGCA CCGAAGCGGC GCAGTTAGCT
GAGCAAATCA ATCTTCAAGA AGAAACCATA GAGTATTGGC AATTGGGTTT TGGCTATCGA
GGCGATCAGT GGTCACTCCA ATCAGAAATT TATACCATCC TTGGTGAGAA AGCCGTGGTT
CCTGAAGGGG TCGGTGGCTA CGCCATTGCT GGGTATACTC TCGGCAATGT CACACCTTAT
GTTATCTACG GTCGGTTTAA CCCGAAAAAT CCGCCCTACC AAGCGCAGTC TGATTGGGGG
TTATCCCCTG TCAATGGCGC GCAATTGGCA GAGGTACAGA AATGGTTGAT TGGTGGCATT
AACTCCACTT ACATCGATCA GCAGACGTTT TCACTCGGAG TCCGCTGGGA CGTCACTGCT
CAGATAGCTT TGAAAGCACA ATATGATTAC ATCCAGATTG CCGATAATGG CTATGGATTA
TGGGCCATTC CTTTAGAAGC GGATTTGCAG GGTCTGCAGG GGCGGGATGT GCAGCTGTTT
TCTGTCAGCG TTAACTTTGT GTTTTAG
 
Protein sequence
MACRLAPWWK SRLLRDNPMI RSLFQTRLMS GVVGLLAMTS GAALAADWSV SGYGSIGYSY 
ENEENLGFLR NIAQPDDYQR NGSFKPDSNI GVQFDLQLDP QWSVTTQWVM KERVEQRFDD
ITELAFVRYT PDENWDIRLG RLGLNAYIAA DSRRIDYAHL WLRPPQEFYG GIFYDAIDGI
DVTYRSQWDE ITWSLGAQYG RIKQKLQNTA SSEISATQSD QTLALVFSLE QDRWFGRLSY
VHVGQLKVDL DGNSLLGIQV VNQLAQAGLG PISTEAAQLA EQINLQEETI EYWQLGFGYR
GDQWSLQSEI YTILGEKAVV PEGVGGYAIA GYTLGNVTPY VIYGRFNPKN PPYQAQSDWG
LSPVNGAQLA EVQKWLIGGI NSTYIDQQTF SLGVRWDVTA QIALKAQYDY IQIADNGYGL
WAIPLEADLQ GLQGRDVQLF SVSVNFVF