| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2029 |
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| Symbol | relA |
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| ID | 5136723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2184005 |
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| End bp | 2186221 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533486 |
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| Product | GTP pyrophosphokinase |
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| Protein accession | YP_001217953 |
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| Protein GI | 147673921 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000178935 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCGG TACGAAGCGC ACACTTAAAC CCAGACCAAC AGTTTGAGCT AGAAACATGG
ATAGCCAGCC TGACCCAAGA GGGGAAAACG GCCGCTAAAT TAACCGCAGT GTATCGCGAT
TGCGAGCAAC TGTTGGCGGG CAATCCACAA GGGCCTCTGC TGCTTTGGCG TGGGCGGGAA
ATGATCGAAA TTTTGATCAC CCTATCGATG GACCGCCCAA CGTTGGTGGC GGCTTTGCTA
TTTCCGATCG CCACCAGTGG TGTGCTGGAT AATGAGTCGC TTGAAGAGGG ATATGGCCGC
GAAGTGGTTA AGCTTATCCA CGGCGTGGAA GAGATGGCGG CGATTGGCCA GCTCAACGTC
ACCATGCATG GCAGTGAAGC GTCAGCGCAA GTGGATAACG TGCGCCGTAT GCTACTGGCG
ATGGTGGATG ATTTCCGCTG CGTGGTGATT AAGCTTGCCG AGCGGATCTG CAACTTGCGT
GAAGTGAAAA ACGAGCCAGA TGAAGTGCGC CGCGTGGCTG CCAAAGAGTG TGCCAACATC
TATGCGCCAC TGGCTAACCG CCTTGGCATT GGTCAGCTCA AATGGGAAAT TGAAGACTAC
GCGTTTCGTT ACCAACAACC GGATACCTAT AAACAGATCG CCAAACAGCT TTCTGAGCGT
CGCATCGTGC GTGAGCAGTA CATTCGTGAT TTTGTCAGCG ACCTGCGTGC TGAGATGAAG
CAATCCGGGA TTAACGCTGA AGTCAGCGGT CGCCCGAAAC ACATCTACAG CATCTGGCGC
AAAATGCAGA AGAAAAGCCT CGCTTTTGAT GAACTGTTTG ATGTGCGTGC GGTGCGGATT
ATTGCTGATA AGCTGCAAGA CTGTTATGCC GCGCTTGGCA TTGTGCACAC TAAATACAAG
CACTTACCGA ACGAGTTTGA TGATTATGTA GCGAACCCCA AACCGAACGG TTACCAGTCC
ATTCATACCG TGATTTTGGG GCCGGAAGGC AAAACCATCG AGATCCAGAT CCGAACCAAG
CAGATGCATG AAGAGTCAGA GCTTGGGGTA GCGGCACACT GGAAATACAA AGAGGGCAGC
AGTGCAGCAC GCAGTGGCTA CGATGAGAAG ATCACTTGGC TGCGTAAACT GCTCGATTGG
CAAGAAGAGA TGTCCGATTC GGGCGAGATG CTCGACGAAC TGCGCAGCCA AGTGTTTGAT
GATCGCGTCT ACGCCTTTAC CCCGAAAGGC GATGTGGTTG ACTTACCTAT GGGCGCGACC
CCGCTCGATT TTGCCTACCA CATTCACTCC GAAGTGGGGC ATCGCTGTAT TGGCGCGAAA
GTGGCAGGAC GTATCGTACC TTTCACTCAC AAATTGCAGA TGGGCGATCA GGTTGAAATC
ATCACCGCCA AAGAGCCGAA TCCATCACGC GATTGGTTGA ACCCATCTCT TGGTTTCGTT
CATTCAGGGC GTGCGCGCGC TAAGATTAAT GCTTGGTTCC GCAAACAGAG CCGTGAAAAA
AATCTCGAAG CGGGACGGGA AATTCTCGAA ATCGAACTGG CGAAAATCGG TGCCAATCTC
AAGCACGCCG AGGCGTATGC GCTCAAGCGC TTTAACGTCA ATAGCGTGGA TGAAATGTAC
GTTGGTATCG GCAGTGGCGA TCTGCGTATC AATCAGATCG TGAACCATAT CAATGCGTTA
GTGAATAAAC CGACCGCTGA GGAAGAAGAT AAGCTCGCGC TGGAAAAACT GCAGGAAAAC
AAAACCCTAA CACCGAATCG CCCGCATAAA GATGCGGTGG TGGTGGAAGG GGTCGATAAC
CTGATGACCC ACCTTGCGCG TTGCTGTCAG CCAATCCCAG GCGATGAAAT CCGTGGCTAC
ATTACCCAAG GCCGTGGTAT TTCGGTGCAC CGCAGCGACT GCGAGCAGCT CGAGGAGCTT
AGCCTTCATG CACCAGAGCG TATCATTGAT ACCGTATGGG GCAGTGGTTT TGTAGGCTCT
TATCTACTGA CCGTACGTGT TGAAGCGATG GAGCGCAGTG GCTTACTGAA AGACATCACG
ACTTTGCTGG CCAATGAGAA AGTCAAAGTG GCGAGTATGA AGAGCCGCTC CGACTATAAA
CGCCAAATCA TCATCATGGA TTTCGATCTT GAGGTGAACA ACGTCGAAGC TTTAGCGCGC
GTTTCTAAAC GCATCGAGCA GATCAAAGAT GTTATGTTGG TCAAACGCTT AGGTTAA
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| Protein sequence | MVAVRSAHLN PDQQFELETW IASLTQEGKT AAKLTAVYRD CEQLLAGNPQ GPLLLWRGRE
MIEILITLSM DRPTLVAALL FPIATSGVLD NESLEEGYGR EVVKLIHGVE EMAAIGQLNV
TMHGSEASAQ VDNVRRMLLA MVDDFRCVVI KLAERICNLR EVKNEPDEVR RVAAKECANI
YAPLANRLGI GQLKWEIEDY AFRYQQPDTY KQIAKQLSER RIVREQYIRD FVSDLRAEMK
QSGINAEVSG RPKHIYSIWR KMQKKSLAFD ELFDVRAVRI IADKLQDCYA ALGIVHTKYK
HLPNEFDDYV ANPKPNGYQS IHTVILGPEG KTIEIQIRTK QMHEESELGV AAHWKYKEGS
SAARSGYDEK ITWLRKLLDW QEEMSDSGEM LDELRSQVFD DRVYAFTPKG DVVDLPMGAT
PLDFAYHIHS EVGHRCIGAK VAGRIVPFTH KLQMGDQVEI ITAKEPNPSR DWLNPSLGFV
HSGRARAKIN AWFRKQSREK NLEAGREILE IELAKIGANL KHAEAYALKR FNVNSVDEMY
VGIGSGDLRI NQIVNHINAL VNKPTAEEED KLALEKLQEN KTLTPNRPHK DAVVVEGVDN
LMTHLARCCQ PIPGDEIRGY ITQGRGISVH RSDCEQLEEL SLHAPERIID TVWGSGFVGS
YLLTVRVEAM ERSGLLKDIT TLLANEKVKV ASMKSRSDYK RQIIIMDFDL EVNNVEALAR
VSKRIEQIKD VMLVKRLG
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