| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2024 |
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| Symbol | cca |
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| ID | 5137140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2178485 |
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| End bp | 2179696 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533481 |
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| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
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| Protein accession | YP_001217948 |
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| Protein GI | 147674076 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000162176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTT ACCTCGTTGG CGGCGCAGTG CGCGATCAAT TGCTGCAACT TCCGGTTTAT
GACCGTGATT GGGTAGTGGT CGGCAGCAGT CCACAAGCTA TGTTAGCGGC AGGCTTTCAA
GCTGTCGGGA AAGATTTTCC GGTGTTTTTG CATCCGAACA GTAAAGAAGA ACATGCCCTT
GCCCGTACCG AACGCAAAAC CGGCGTAGGT TACACCGGCT TTGCTTGCCA CTATGCTCCA
GACGTGAGTT TGGAAGACGA TCTGCTGCGC CGCGATCTGA CCATCAACGC GATGGCGCAA
GATAACTCTG GGCAACTGAT TGATCCTTAT GGCGGTCAGC GCGATCTCGC CGCGAAAGTG
CTGCGCCATG TTTCGCCCGC GTTTGTGGAA GATCCCTTGC GTGTGCTGCG CGTGGCGCGC
TTTGCGGCTA AGCTGCATCA CCTAGGTTTC ACCGTTGCCG AAGAGACGAT GCAATTAATG
GCGAAGATTG TGCAATCGGG CGAGTTGCAG CACTTAACCG CCGAGCGTGT GTGGCAAGAG
TGGCATAAAT CGCTCTCGAC GAATCATCCC GAAGTGTTTT TGCAGGTGTT ACGTGATTGT
GGCGCGCTGG CGGTGGTGCT GCCTGAAATC GATCGCTTGT TCGGCGTGCC ACAACCGGAA
AAATGGCACC CAGAGATCGA CACCGGCATT CACACGCTAA TGGTCGCCAA GCAAGCCGCA
CAACTTTCTG ATTCCCTTCC CGTGCGTTTT GCCGCGCAAG TGCATGATTT AGGAAAAGGC
GTGACGCCAC CTTCTGAATG GCCAAGCCAT AAATTGCACT GCCATACTGG GCTTAATATC
ATTGAATCAT TGTGCGAGCG CATTCGCGTG CCTAATGAGT TTCGTGATTT AGCGCTCGCG
GTGTGCGCGC AGCATTCCAA TATCCATCGT GCGGACGAGT TAAAGCCTAC CACCAAGCTG
AAAGTGCTGG GGCTTTTGGA TGTGTGGCGC AAACCGGAGC GTCTTGAGCA AGTGCTACTG
TGTTGTGAAG CAGATCATCG TGGCCGTTTA GGTTTAGAGA ATGAGCCGTA TCCGCAGCGT
GAGATTTTCC TGCGTGCCTA CCAAGCCGCC CTTGGGGTAG CAGTTCAAGC CGTGATAGCG
GATGGCTTTC ACGGCAAGCA GATCAAAGAA GAGTTGGATA AACGGCGCGT ATCGGCAATC
GAGGCTCTGT AG
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| Protein sequence | MQIYLVGGAV RDQLLQLPVY DRDWVVVGSS PQAMLAAGFQ AVGKDFPVFL HPNSKEEHAL
ARTERKTGVG YTGFACHYAP DVSLEDDLLR RDLTINAMAQ DNSGQLIDPY GGQRDLAAKV
LRHVSPAFVE DPLRVLRVAR FAAKLHHLGF TVAEETMQLM AKIVQSGELQ HLTAERVWQE
WHKSLSTNHP EVFLQVLRDC GALAVVLPEI DRLFGVPQPE KWHPEIDTGI HTLMVAKQAA
QLSDSLPVRF AAQVHDLGKG VTPPSEWPSH KLHCHTGLNI IESLCERIRV PNEFRDLALA
VCAQHSNIHR ADELKPTTKL KVLGLLDVWR KPERLEQVLL CCEADHRGRL GLENEPYPQR
EIFLRAYQAA LGVAVQAVIA DGFHGKQIKE ELDKRRVSAI EAL
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