Gene VC0395_A2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2021 
Symbol 
ID5137700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2175333 
End bp2175941 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content48% 
IMG OID640533478 
Producthypothetical protein 
Protein accessionYP_001217945 
Protein GI147674643 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000002011 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAC TGATCTGCAT GGTGCTCTTT TCCATGTTGG CTGCACCAAC GTTCGCGCAA 
GACCGCTACA TCGCGGACAA ACTCTTTACT TACATGCATT CAGGCCCAAG TAACCAATAC
CGCATTCTCG GCAGCATTGA CGCCGGAGAA AAGGTGAAGC TGATTGAGGT GAATAAAGAG
AGTGGTTATA GCCATATTGC TGATGAGCGC GGCCGTACAG GTTGGGTTGA AAGCCGTTTT
ATCACTCGTG AAGTGAGCAA TACTCTGCGC TTACCGGCGC TAGAAAAAGA GCTAGAGGAA
GTGAAAAAGC TGTTAGCCAA TGCTCGCCAA AATGCCGATA GTGAAAAAGC AGGATTAGCG
GAATCACTTG AACTGCGTAA CCAACAAATT GCCGATCTAG AGCGTAACTA TGCCGACATC
AGCAAGCAGT TGACCGATTC ACAAAGCGAA ATTCGTGAAC TGCGCGCCAA ACTCGATACG
CAAAAAGAAG ATCTGTTACT GAAATACTTC ACCTACGGTG GTGGTGTTGC TGGTATCGGT
TTACTGCTTG GCTTGGTGTT ACCACATATT ATTCCTCGCC GTAAACGCCA CCCTGCCGGA
TGGGCATAA
 
Protein sequence
MKKLICMVLF SMLAAPTFAQ DRYIADKLFT YMHSGPSNQY RILGSIDAGE KVKLIEVNKE 
SGYSHIADER GRTGWVESRF ITREVSNTLR LPALEKELEE VKKLLANARQ NADSEKAGLA
ESLELRNQQI ADLERNYADI SKQLTDSQSE IRELRAKLDT QKEDLLLKYF TYGGGVAGIG
LLLGLVLPHI IPRRKRHPAG WA