Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2021 |
Symbol | |
ID | 5137700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2175333 |
End bp | 2175941 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533478 |
Product | hypothetical protein |
Protein accession | YP_001217945 |
Protein GI | 147674643 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000002011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAC TGATCTGCAT GGTGCTCTTT TCCATGTTGG CTGCACCAAC GTTCGCGCAA GACCGCTACA TCGCGGACAA ACTCTTTACT TACATGCATT CAGGCCCAAG TAACCAATAC CGCATTCTCG GCAGCATTGA CGCCGGAGAA AAGGTGAAGC TGATTGAGGT GAATAAAGAG AGTGGTTATA GCCATATTGC TGATGAGCGC GGCCGTACAG GTTGGGTTGA AAGCCGTTTT ATCACTCGTG AAGTGAGCAA TACTCTGCGC TTACCGGCGC TAGAAAAAGA GCTAGAGGAA GTGAAAAAGC TGTTAGCCAA TGCTCGCCAA AATGCCGATA GTGAAAAAGC AGGATTAGCG GAATCACTTG AACTGCGTAA CCAACAAATT GCCGATCTAG AGCGTAACTA TGCCGACATC AGCAAGCAGT TGACCGATTC ACAAAGCGAA ATTCGTGAAC TGCGCGCCAA ACTCGATACG CAAAAAGAAG ATCTGTTACT GAAATACTTC ACCTACGGTG GTGGTGTTGC TGGTATCGGT TTACTGCTTG GCTTGGTGTT ACCACATATT ATTCCTCGCC GTAAACGCCA CCCTGCCGGA TGGGCATAA
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Protein sequence | MKKLICMVLF SMLAAPTFAQ DRYIADKLFT YMHSGPSNQY RILGSIDAGE KVKLIEVNKE SGYSHIADER GRTGWVESRF ITREVSNTLR LPALEKELEE VKKLLANARQ NADSEKAGLA ESLELRNQQI ADLERNYADI SKQLTDSQSE IRELRAKLDT QKEDLLLKYF TYGGGVAGIG LLLGLVLPHI IPRRKRHPAG WA
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