Gene VC0395_A2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2009 
Symbol 
ID5136565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2160990 
End bp2161577 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID640533466 
Productesterase YqiA 
Protein accessionYP_001217933 
Protein GI147673053 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000000001762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTC GTCCAGCTTT GCTGCTCTAC ATCCATGGTT TTAACAGCTC ACCGTTGTCA 
CACAAAGCGC AAGTGATGCA GCAGTATTGC CAGCAGCACA GGCCTGATAT CAAAGTCGTG 
GTGCCCAAGT TACCGAGCTT TCCTGCGCAA GCGGCGCAGC ATCTGTTGTC TGTCGTGGAG 
CAATATCGCG CGCAATATCG GATCGGGTTG GTCGGCAGTT CATTAGGCGG TTATCTCTCC 
ACTTGGTTAA ATGCCCAATT TGGCTTTCGC GCGGTACTGA TCAATCCTGC TGTGAAGCCT 
TACGAGTTAT TAGCCGATTT TCTCGGTGAG CAGGTTAATC CTTACACCCA AGAGCATTAC 
GTGCTCGAAG CGTGTCATAT TGATGAGTTG AAAGCGCTCG ATACGCCAGT GCTGAAACAG 
CCAAGCGATT TTTGGCTACT GCAGCAAAAA GGCGATGAAG TGCTGGATTA TCGACAAGCG 
GTTGAGAAGT ACCAAGCAGC TAAACTGACC GTGGAAGAGG GCGGTGACCA CAGTTTTGTG 
GATTTTGAAC GTTACCCAGA GCAGATTATT CACTTCCTTG AACTTTGA
 
Protein sequence
MTARPALLLY IHGFNSSPLS HKAQVMQQYC QQHRPDIKVV VPKLPSFPAQ AAQHLLSVVE 
QYRAQYRIGL VGSSLGGYLS TWLNAQFGFR AVLINPAVKP YELLADFLGE QVNPYTQEHY 
VLEACHIDEL KALDTPVLKQ PSDFWLLQQK GDEVLDYRQA VEKYQAAKLT VEEGGDHSFV 
DFERYPEQII HFLEL