| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2007 |
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| Symbol | parC |
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| ID | 5137622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2156492 |
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| End bp | 2158777 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533464 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001217931 |
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| Protein GI | 147674657 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000513735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTG AAATCAGCTT TGATGGCGTT GAACAACTGC CGCTGCGCAA ATTTACTGAA
GACGCTTATC TCAACTATTC GATGTACGTC ATCATGGACC GTGCCTTGCC CTACATTGGC
GATGGCTTAA AACCGGTTCA GCGACGCATC ATCTACGCGA TGTCTGAGTT GGGTCTCTCG
GCATCGGCCA AATACAAAAA ATCAGCACGT ACCGTGGGTG ACGTACTGGG TAAATACCAT
CCGCATGGCG ATTCGGCCTG TTACGAAGCC ATGGTGTTGA TGGCGCAGCC ATTCTCTTAT
CGCTATCCGT TAGTGGATGG TCAAGGTAAC TGGGGGGCAC CGGACGATCC GAAATCGTTC
GCGGCCATGC GTTATACCGA AGCCAAACTG TCAAAGTTTG CCGAGATTCT GCTTAGCGAA
TTAGGCCAAG GCACCGTAGA TTGGCAACCA AACTTTGACG GCACCATGCA AGAGCCGAAA
ATGTTGCCAG CGCGTCTGCC GCACATTCTG CTCAATGGTG TCACCGGCAT CGCGGTAGGT
ATGGCCACCG ACATTCCACC GCATAACGTG CGTGAAGTGG CGGATGCGAC GATTCACCTC
ATCGATAATC CTAACGCGCC GCTGACCGAT TTAATGCAGT ACGTCAAAGG CCCAGATTTC
CCGACCGAAG CGGAAATCAT CACCCCAACG GTTGAGCTAG AGAAGATTTA CCGCTCTGGC
CGTGGCAGCA TCAAAATGCG TGCTGTGTGG TGCAAAGAAG GCTCGGATAT CGTGATCACC
GCGCTGCCGC ATCAAGTCTC TGGCGCGAAG CTGCTGGAGC AGATCGCCGC GCAGATGCGT
GCTAAGAAAC TGCCGATGGT GGAAGACTTA CGCGATGAAT CGGATCACGA GAACCCAACG
CGTATCGTGA TCGTGCCGCG CTCAAATCGC GTCGATTGCG ATCTGCTGAT GAACCACTTG
TTCGCTTCTA CGGATCTGGA AAAGAGCTTC CGCGTTAACC TGAATATGAT TGGTCTCGAC
AATCGTCCTC AGGTCAAAGG CTTAGTGCAG ATCTTGAGCG AGTGGATCTC GTTCCGCCGT
GAAACGGTAC GCTCACGTTT GCAATATCGC CTCGATAAAG TGCTGGCTCG TTTGCACATT
TTGCAAGGTT TGCTGATTGC TTATCTCAAC CTTGATGAAG TGATTGAGAT CATCCGCAAC
GAAGACGATC CGAAAGCGGT GTTGATGGCA CGCTTTGATC TGACCGATAT TCAAGCGGAC
GCGATCTTAG ATACCAAGTT ACGCCACTTG GCGAAACTGG AAGAGATGAA GATCCGCGGT
GAGCAAGATG AGCTAGAAAA AGAGCGTAAA AAACTGGAAG AGCTACTCGG CTCTGAACGT
CGCCTCAATA ATCTGCTCAA AAAAGAGATC AAAGCGGATG CCGATAAGTT TGGCGATGAT
CGCCGCTCAC CACTGGTCGA ACGCGAAGAA GCCAAAGCGC TGACCGAGCG TGATTTGATG
CCAAGCGAAG CGATCACCGT CGTGCTGTCT GAAAAAGGCT GGATCCGTCA CGCCAAAGGT
CATGATGTGG ATTGCCAAAG CTTGAACTAC AAAGCAGGCG ATAATTACCT CACACATGCC
TGTGGTAAGA GCAACCAGCA AGCAGTGTTC TTGGGCAGTG ATGGCCGCAG TTACTCGCTC
GAATCGCATA CGCTGCCATC AGCGCGCGGT CAAGGTGAGC CGATCACGGG GCGTTTGAAC
GTAGCGGAAG GCACTACGAT TCGTCAGGTT GTGATGGGCG AGGAAGATCA GCTCTGGTTG
GTGGGTTCAG ATGCCGGCTA CGGCTTTGTG TGTAAAGGCG ATGACCTACT GTCGAAAAAC
CGCAGTGGTA AAGCTTTGAT CAATCTGCCA GAAAACTCGG AAGTGATGAC GCCACAAGTG
ATCGCCGATC TCGATAACGA TGAGATTTTA GCCATTACTA ACCAAGGGCG AATGTTGCTG
TTCCCGATTA AGGATCTGCC GCAACTGAGC AAAGGTAAAG GTAACAAGAT CATCAACATT
CCTGCGGCGA AAGCGAAAAC CCGTGAGGAA GTGCTGTCCA ACCTGATGGT GTTGCCACAA
GGCGCATCGA TTACCCTGTA TGCAGGCAAA CGTAAGCTAG GCTTGAAGGT GAGCGATCTG
GATAACTTCC GTGGTGAACG CGGCCGTCGT GGCGCTTTGT TGCCCCGTGG CTTGCAACGC
GTGACCGCGA TTGAGATTGA AACCTCAGCG GAGCCAGAAT CAACCCCGCA TTCGGAAGAT
GAATAG
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| Protein sequence | MSTEISFDGV EQLPLRKFTE DAYLNYSMYV IMDRALPYIG DGLKPVQRRI IYAMSELGLS
ASAKYKKSAR TVGDVLGKYH PHGDSACYEA MVLMAQPFSY RYPLVDGQGN WGAPDDPKSF
AAMRYTEAKL SKFAEILLSE LGQGTVDWQP NFDGTMQEPK MLPARLPHIL LNGVTGIAVG
MATDIPPHNV REVADATIHL IDNPNAPLTD LMQYVKGPDF PTEAEIITPT VELEKIYRSG
RGSIKMRAVW CKEGSDIVIT ALPHQVSGAK LLEQIAAQMR AKKLPMVEDL RDESDHENPT
RIVIVPRSNR VDCDLLMNHL FASTDLEKSF RVNLNMIGLD NRPQVKGLVQ ILSEWISFRR
ETVRSRLQYR LDKVLARLHI LQGLLIAYLN LDEVIEIIRN EDDPKAVLMA RFDLTDIQAD
AILDTKLRHL AKLEEMKIRG EQDELEKERK KLEELLGSER RLNNLLKKEI KADADKFGDD
RRSPLVEREE AKALTERDLM PSEAITVVLS EKGWIRHAKG HDVDCQSLNY KAGDNYLTHA
CGKSNQQAVF LGSDGRSYSL ESHTLPSARG QGEPITGRLN VAEGTTIRQV VMGEEDQLWL
VGSDAGYGFV CKGDDLLSKN RSGKALINLP ENSEVMTPQV IADLDNDEIL AITNQGRMLL
FPIKDLPQLS KGKGNKIINI PAAKAKTREE VLSNLMVLPQ GASITLYAGK RKLGLKVSDL
DNFRGERGRR GALLPRGLQR VTAIEIETSA EPESTPHSED E
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