Gene VC0395_A2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2005 
Symbol 
ID5137907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2155364 
End bp2156104 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID640533461 
Producthypothetical protein 
Protein accessionYP_001217928 
Protein GI147674897 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000011223 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGC ACCAGTTTGA ACACCCTCTC AATGAAAAAA CGCGCATCTA CCTGCGTGTC 
GAAGCGCTGC TCAATCAGAT GGAGCGAGCG TCCACTTTCA GTGATGGGAT TCAACATCAA
CTCTTTTTCC GCTCACTGTT CGATATGCTG GAGATTTTTG AGCAGATCCA ACTGAAAAGT
GAACTGGCTA AAGATATGGA AAAACAGCGC TTAACATACC GCAGTTGGCT CCATGTAGAA
GGCGTAGATC AAGAGATGCT TAACTCGCTG CTCACCGAAG TCGATGAAGT TCATCGGGAT
CTGATGAGTG CCGAGCGTTT TGGCCAATCA CTCAAAGAAG ACCGTTTCCT CAGTGCAATT
CGTCAGCGCT TTAATTTACC GGGTGGTTCC TGCTGTTTTG ATCTGCCAGC GCTGCACTAC
TGGCTGCATC TGCCGCTGGA TCGCAAAATG CGTGATGCCC AGCAGTGGAT GCAAACCGTG
ACGCCGCTTT CGAATGCACT CAAACTCTGG CTTAAATTGA CTCGCGAAAC CGGCCACTAC
CGCTCACGCA TGGCAAGCAA CGGTTTCTAC CAAAGTGATG CGGAAGATGC CAATATCCTA
CGCCTTGCGA TTCCGCTCGA ATACGGTGTG TACCCGATGA TTTCTGGGCA CAAAAACCGC
TTTGCTATCA AGTTTATCGA TTTTCACAGC GGGCAAGCCT GCACTCAAGA TATCGCCTTT
GATTTGGCGG TGTGCTGCTA A
 
Protein sequence
MTTHQFEHPL NEKTRIYLRV EALLNQMERA STFSDGIQHQ LFFRSLFDML EIFEQIQLKS 
ELAKDMEKQR LTYRSWLHVE GVDQEMLNSL LTEVDEVHRD LMSAERFGQS LKEDRFLSAI
RQRFNLPGGS CCFDLPALHY WLHLPLDRKM RDAQQWMQTV TPLSNALKLW LKLTRETGHY
RSRMASNGFY QSDAEDANIL RLAIPLEYGV YPMISGHKNR FAIKFIDFHS GQACTQDIAF
DLAVCC