Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2005 |
Symbol | |
ID | 5137907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2155364 |
End bp | 2156104 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533461 |
Product | hypothetical protein |
Protein accession | YP_001217928 |
Protein GI | 147674897 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000011223 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACGC ACCAGTTTGA ACACCCTCTC AATGAAAAAA CGCGCATCTA CCTGCGTGTC GAAGCGCTGC TCAATCAGAT GGAGCGAGCG TCCACTTTCA GTGATGGGAT TCAACATCAA CTCTTTTTCC GCTCACTGTT CGATATGCTG GAGATTTTTG AGCAGATCCA ACTGAAAAGT GAACTGGCTA AAGATATGGA AAAACAGCGC TTAACATACC GCAGTTGGCT CCATGTAGAA GGCGTAGATC AAGAGATGCT TAACTCGCTG CTCACCGAAG TCGATGAAGT TCATCGGGAT CTGATGAGTG CCGAGCGTTT TGGCCAATCA CTCAAAGAAG ACCGTTTCCT CAGTGCAATT CGTCAGCGCT TTAATTTACC GGGTGGTTCC TGCTGTTTTG ATCTGCCAGC GCTGCACTAC TGGCTGCATC TGCCGCTGGA TCGCAAAATG CGTGATGCCC AGCAGTGGAT GCAAACCGTG ACGCCGCTTT CGAATGCACT CAAACTCTGG CTTAAATTGA CTCGCGAAAC CGGCCACTAC CGCTCACGCA TGGCAAGCAA CGGTTTCTAC CAAAGTGATG CGGAAGATGC CAATATCCTA CGCCTTGCGA TTCCGCTCGA ATACGGTGTG TACCCGATGA TTTCTGGGCA CAAAAACCGC TTTGCTATCA AGTTTATCGA TTTTCACAGC GGGCAAGCCT GCACTCAAGA TATCGCCTTT GATTTGGCGG TGTGCTGCTA A
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Protein sequence | MTTHQFEHPL NEKTRIYLRV EALLNQMERA STFSDGIQHQ LFFRSLFDML EIFEQIQLKS ELAKDMEKQR LTYRSWLHVE GVDQEMLNSL LTEVDEVHRD LMSAERFGQS LKEDRFLSAI RQRFNLPGGS CCFDLPALHY WLHLPLDRKM RDAQQWMQTV TPLSNALKLW LKLTRETGHY RSRMASNGFY QSDAEDANIL RLAIPLEYGV YPMISGHKNR FAIKFIDFHS GQACTQDIAF DLAVCC
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