| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1997 |
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| Symbol | ampD |
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| ID | 5135764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2148400 |
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| End bp | 2148945 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533454 |
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| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
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| Protein accession | YP_001217921 |
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| Protein GI | 147673296 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGATA GTCAAGGCTG GTACCGCCTC GCCAGAAAAG TACCTTCTCC ACATTGTGAT
GTGCGCCATG ATAGTGAGGA TATTTCGCTA CTTGTGGTGC ACAACATCAG CTTGCCCCCC
GGCCAGTTTG GCGGCCCGTA CATTGAGCAG TTTTTTCTGG GCGAGCTGGA TGCCAATCAA
CATTCGTTTT TTAAGGTAAT CGCCAAGATG CGCGTGTCGG CGCACTGCGT GATCCGCCGA
GATGGTGAGG TGGTGCAGTT TGTGCCGTTT CATCTGCGCG CGTGGCATGC GGGTGTTTCC
TCATTTGCAG GCCGAGCCAA GTGCAATGAT TACTCGATTG GTATTGAGCT GGAGGGGAGT
GATTTTGTGC CGTATACCGA TGCGCAATAT CAGGCGCTGA CTGAGCTGAC CCAAGCCTTG
ATGGTGCGCT ACCCGCACAT CACGTTGCCG CGCATTACTG GACATCAATA TATTGCGCCG
CTGCGTAAAA CCGACCCCGG TTTGGTGTTT GACTGGCGGC GTTTTCGGGC TGGGTTGAAG
TCATAG
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| Protein sequence | MIDSQGWYRL ARKVPSPHCD VRHDSEDISL LVVHNISLPP GQFGGPYIEQ FFLGELDANQ
HSFFKVIAKM RVSAHCVIRR DGEVVQFVPF HLRAWHAGVS SFAGRAKCND YSIGIELEGS
DFVPYTDAQY QALTELTQAL MVRYPHITLP RITGHQYIAP LRKTDPGLVF DWRRFRAGLK
S
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