| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1995 |
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| Symbol | xerD |
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| ID | 5136177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2146613 |
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| End bp | 2147521 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533452 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001217919 |
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| Protein GI | 147673043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAAG CCTTATCTCC CGACCAAGGG TTGGTGGAAC AATTTTTAGA TACCATGTGG
TTTGAGCGCG GTTTGGCAGA AAATACCGTG GCGTCTTATC GTAATGACTT GAGTAAGCTA
TTAGAGTGGA TGGCGCAGAA CCAGTATCGG CTCGATTTTA TTAGCTTTGC TGGTTTGCAG
GAGTATCAAA GCTGGCTGTC GGAGCAAAAT TACAAACCGA CCTCGAAAGC GCGCATGTTG
TCGGCGATTC GTCGCCTGTT TCAATATCTG CATCGGGAAA AGGTGCGCGC TGATGATCCG
AGTGCGCTGT TGGTGAGCCC GAAACTGCCA ACGCGCTTAC CAAAAGATTT GAGCGAAGCG
CAAGTTGAAG CTTTGCTGAG TGCGCCAGAT CCGCAAAGTC CACTTGAGCT GCGTGATAAA
GCCATGCTGG AATTGCTGTA TGCTACGGGA CTGCGTGTGA CAGAGCTGGT CTCACTGACC
ATGGAAAACA TGAGCTTGCG CCAAGGTGTG GTGCGAGTCA TGGGTAAGGG TGGTAAAGAG
CGTTTGGTGC CTATGGGTGA AAATGCCATT GAATGGATTG AAACTTTTTT GCAGCAGGGA
CGGTCTTTAC TGCTAGGGGA GCAGACGTCG GATATCGTTT TCCCCAGTAG CCGCGGTCAG
CAGATGACCC GGCAAACCTT CTGGCATCGC ATTAAACACT ATGCGGTTAT TGCAGGAATT
GATGTGGAAA AACTCTCGCC GCACGTATTG CGCCATGCGT TTGCCACTCA CTTGCTCAAT
TATGGGGCCG ATCTGCGCGT AGTGCAGATG TTGCTTGGGC ATAGTGATTT ATCGACCACA
CAAATTTATA CTCATGTCGC CACTGAGCGG CTTAAACAAC TCCACAACGA GCACCATCCA
AGGGCTTGA
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| Protein sequence | MSEALSPDQG LVEQFLDTMW FERGLAENTV ASYRNDLSKL LEWMAQNQYR LDFISFAGLQ
EYQSWLSEQN YKPTSKARML SAIRRLFQYL HREKVRADDP SALLVSPKLP TRLPKDLSEA
QVEALLSAPD PQSPLELRDK AMLELLYATG LRVTELVSLT MENMSLRQGV VRVMGKGGKE
RLVPMGENAI EWIETFLQQG RSLLLGEQTS DIVFPSSRGQ QMTRQTFWHR IKHYAVIAGI
DVEKLSPHVL RHAFATHLLN YGADLRVVQM LLGHSDLSTT QIYTHVATER LKQLHNEHHP
RA
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