| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1993 |
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| Symbol | recJ |
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| ID | 5135150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2144046 |
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| End bp | 2145800 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533450 |
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| Product | ssDNA exonuclease RecJ |
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| Protein accession | YP_001217917 |
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| Protein GI | 147674577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCTGTC ACAGCATGAT AGAAATCCAG CGACGCCCCG AACCTGATCT CTCACTTCTC
CCCGACCACA TCGACCCACT GTTACGTCGG CTTTACCTGA GCCGTGGTGT AAGCAACGTG
GCACAACTTG AAAAAGCCGC CAAAGCGCTG CACTCATTCA AGCAGTTACA TGGTATTGAT
CGTGCGGTTG AGTTGCTGTT CGCAGCGATT GCTGAGCAAA AACGCATCAT AGTCGTCGGT
GATTTTGATG CCGATGGCGC AACCAGTTCG GCACTTTCCG TGCTCGCGCT GCGTATGCTC
GGTAGTCGTA ATGTCGATTA CTTAGTGCCA AACCGTTTTG AAGATGGTTA TGGTCTGAGC
CCTGAAGTGG TTGATCAAGC GATTGAGCGT GGCGCAGAGA TGATCATGAC CGTGGATAAC
GGCGTTTCAT CACTGGAAGG GGTGCGTTAC GCCAAACAGA AAGGGCTGCA AGTGGTGGTC
ACCGATCATC ACTTACCGGG ACAAGAACTC CCTGAAGTCG ATGCCATGGT AAACCCGAAC
TTGCAGCAGT GTGCTTTTCC TTCTAAGGCG CTGGCTGGGG TGGGGGTTGC TTTCTATTTG
ATGATGGCAC TTTGTGTGCA CATGCGTCAG CAAGGTTGGT TTGCCGCGCA AGGCATGGTT
GAACCGAAAT TGATGGAACT GATCGATTTA GTGGCACTCG GTACGGTCGC CGATGTGGTG
CCACTGGATG ACAACAATCG TATTTTGGTG CACCAAGGTT TGCAGCGTAT TCGTGCGGGT
TTAGCGCGCC CCGGTATTCA AGCTCTGATT GAAGTCGCCA AACGGGATGC GCGCCGTTTG
GTCGCTGCTG ATTTTGGCTT TGCGCTTGGA CCACGGATTA ACGCCGCAGG GCGTTTGGAT
GATATGTCGT TCGGCGTTGA ACTTTTGCTG TGTAACAACA TTCACGCTGC GCGGCGTATG
GCGAGTGAGC TGGACGGCCT CAATCAAACC CGAAAAGAGA TTGAAGAGGG GATGAAGCAA
GAGGCGGTCG CGTTTTGTGA GCGTTTGCAA CTGAGCGATG ATCGCGAGCT GCCTTACGGT
TTAGTGCTGT TTCAGCGCGA TTGGCACCAA GGGGTGATCG GCATTCTTGC TTCGCGCATC
AAAGAGAAAT ACCACCGACC CGTGATTGCG TTTGCTGAAG GTGGTGATGG CAAGCTAAAA
GGTTCATGTC GCTCGGTTCC CGGTCTGCAT ATGCGTGATG CACTAGATAA AATTGATACG
CAAAACCCGG GCATCATACT CAAATTTGGT GGTCACGCGA TGGCGGCTGG ATTAACCATT
GAAGAGCAAA ATTTTGAACA TTTTTGCCGA TTGTTTGACC AGCTAGTGCG TGAAGAGCTG
GATGAAGCAG CACTCCAAGG CATCATCCTC AGCGATGGCG AACTGAAACC GGAAGAGTTT
TCGCTGCATA CCGCCGAATT ACTGCGTGCC GGTGGCCCGT GGGGGCAAGC GTTTCCTGAA
CCCCTATTTG ATGGTGAATT TAAAGTGCTG CACCAAAAAC TGGTTGGCGA AAAACACCTC
AAACTGATGC TTGAGCCGCT GTATAAAGGC TTTCCAACCA ATGTGATGAT CGACGGGATT
GCGTTTAATG TCGACCTACG CCGCTGGCCG GATGTCTCAG TCAAAACGGT ACGTTTGGCG
TACAAACTCG ACATCAACGA GTTTCGCGGT AATCAATCAT TGCAACTCAT GATTGATTAT
CTGGAAGCGA AATGA
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| Protein sequence | MACHSMIEIQ RRPEPDLSLL PDHIDPLLRR LYLSRGVSNV AQLEKAAKAL HSFKQLHGID
RAVELLFAAI AEQKRIIVVG DFDADGATSS ALSVLALRML GSRNVDYLVP NRFEDGYGLS
PEVVDQAIER GAEMIMTVDN GVSSLEGVRY AKQKGLQVVV TDHHLPGQEL PEVDAMVNPN
LQQCAFPSKA LAGVGVAFYL MMALCVHMRQ QGWFAAQGMV EPKLMELIDL VALGTVADVV
PLDDNNRILV HQGLQRIRAG LARPGIQALI EVAKRDARRL VAADFGFALG PRINAAGRLD
DMSFGVELLL CNNIHAARRM ASELDGLNQT RKEIEEGMKQ EAVAFCERLQ LSDDRELPYG
LVLFQRDWHQ GVIGILASRI KEKYHRPVIA FAEGGDGKLK GSCRSVPGLH MRDALDKIDT
QNPGIILKFG GHAMAAGLTI EEQNFEHFCR LFDQLVREEL DEAALQGIIL SDGELKPEEF
SLHTAELLRA GGPWGQAFPE PLFDGEFKVL HQKLVGEKHL KLMLEPLYKG FPTNVMIDGI
AFNVDLRRWP DVSVKTVRLA YKLDINEFRG NQSLQLMIDY LEAK
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