| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1989 |
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| Symbol | aceF |
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| ID | 5136758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2136219 |
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| End bp | 2138132 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533446 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001217913 |
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| Protein GI | 147674758 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTAG GAAAAGTAAT GGCAATCGAA ATTTATGTAC CTGACATCGG TGCGGATGAG
GTTGAAGTCA CTGAGATTCT CGTCAAAGTC GGCGACAAAG TGGCTGAAGA GCAATCTCTG
ATCACGGTTG AAGGCGACAA AGCTTCTATG GAAGTTCCTG CGTCTCAAGC GGGTATCGTT
AAAGAGATCA AAGTAGTGGC AGGTGACAAA GTGTCTACTG GCTCTCTGAT CATGGTCTTT
GAAGCGGAAG GTGCAGCAGC GGCAGCACCA GCTCCTGCGC CTCAAGCGGC AGCACCAGTT
GCTGCGGCTC CAGCGGCCGC TGCACTGAAA GAAGTGCAAG TACCAGACAT TGGCGGTGAT
GAAGTTGAAG TGACTGAAAT CATGGTCAAA GTGGGCGATG TGGTTGCGGA AGAGCAATCT
CTGATCACCG TTGAAGGCGA CAAAGCGTCA ATGGAAGTAC CTGCACCTTT CGCTGGTACG
GTTAAAGAGA TCAAAATCGC TGCGGGCGAC AAAGTATCAA CAGGTTCACT GATCATGGTG
TTTGAAGTAG CCGGTGCTGC GCCAGTTGCA GCACCAGTTC AAGCTGCGGC ACCAGCGGCA
GCTGCTGCTC CAGCTGTTGC AGCACTGAAA GAAGTTCAAG TACCTGATAT CGGCGGTGAC
GAAGTGACCG TAACGGAAAT CATGGTTAAC GTGGGCGACA GCATCAGCGA AGAGCAATCT
CTGATCACCG TAGAAGGCGA TAAGGCTTCT ATGGAAGTAC CAGCACCTTT TGCTGGAACT
CTCAAAGAGA TCAAAGTGGC TGCAGGCGAT AAAGTGAAAA CAGGTTCGCT GATCATGGTG
TTTGAAGTTG CTGGCGCAGC GCCAGTCGCG GCACCAGTTC AAGCAGCACC AGCACCAGCA
CCTGCGGCAG CGCCTGCTCA AGCAGCAGCT CCTGCGGCGG CTGCACCTGC AACAAGTGGT
GAATTCCAAG AAAACCATGA GTACTCACAC GCTTCTCCAG TCGTGCGTCG TCTGGCTCGT
GAATTTGGTG TTAACCTAGC CAAAGTCAAA GGCTCTGGCC GCAAGAACCG TATCCTGAAA
GAAGACGTAC AGAACTACGT GAAAGAAGCG CTGAAACGTC TGGAATCTGG CGCGCAAGCG
GCGGCTTCAG GTAAAGGTGA TGGCGCAGCG CTGGGCTTAC TGCCTTGGCC AAAAGTGGAC
TTCAGCAAGT TCGGTGATAC CGAAGTGCAA CCACTGTCTC GCATCAAGAA AATCTCGGGT
GCTAACCTGC ACCGTAACTG GGTGATGATC CCGCACGTGA CCCAATGGGA CAATGCAGAC
ATCACTGAGC TAGAGAAATT CCGTCAAGAG CAAAACGCGA TGGAAGCGAA GCGCGACACT
GGCATGAAGA TCACTCCGCT GGTGTTCATC ATGAAAGCCG CTGCGAAAGC GCTGGAAGCT
TTCCCTGCGT TCAACTCTTC TCTGTCTGAC GATGGCGAAA GCTTGATCCT GAAGAAATAC
GTGAACATCG GTATTGCAGT GGATACACCA AATGGTCTGG TGGTTCCTGT GTTTAAAGAT
GTGAACAAGA AAGGCATCTA CGAGCTGTCA AAAGAGCTGG CTGAAGTCTC GAAGAAAGCC
CGTGGCGGTA AGCTGACTGC CGCTGACATG CAAGGTGGCT GTTTCACTAT CTCTAGCCTA
GGCGGTATTG GCGGTACAGC GTTTACCCCA ATCGTTAACG CACCTGAAGT GGCTATTTTG
GGTGTGTCTA AGTCTGAGAT GAAGCCAGTG TGGAACGGCA AAGAGTTCGC GCCACGTCTG
CAACTGCCAC TGTCACTGTC TTACGATCAC CGCGTGATCG ACGGTGCAGA AGGTGCACGC
TTCATTACTT ACCTGAACGA GTGTCTAAGC GACATCCGTC GTCTGGTACT GTAA
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| Protein sequence | MKVGKVMAIE IYVPDIGADE VEVTEILVKV GDKVAEEQSL ITVEGDKASM EVPASQAGIV
KEIKVVAGDK VSTGSLIMVF EAEGAAAAAP APAPQAAAPV AAAPAAAALK EVQVPDIGGD
EVEVTEIMVK VGDVVAEEQS LITVEGDKAS MEVPAPFAGT VKEIKIAAGD KVSTGSLIMV
FEVAGAAPVA APVQAAAPAA AAAPAVAALK EVQVPDIGGD EVTVTEIMVN VGDSISEEQS
LITVEGDKAS MEVPAPFAGT LKEIKVAAGD KVKTGSLIMV FEVAGAAPVA APVQAAPAPA
PAAAPAQAAA PAAAAPATSG EFQENHEYSH ASPVVRRLAR EFGVNLAKVK GSGRKNRILK
EDVQNYVKEA LKRLESGAQA AASGKGDGAA LGLLPWPKVD FSKFGDTEVQ PLSRIKKISG
ANLHRNWVMI PHVTQWDNAD ITELEKFRQE QNAMEAKRDT GMKITPLVFI MKAAAKALEA
FPAFNSSLSD DGESLILKKY VNIGIAVDTP NGLVVPVFKD VNKKGIYELS KELAEVSKKA
RGGKLTAADM QGGCFTISSL GGIGGTAFTP IVNAPEVAIL GVSKSEMKPV WNGKEFAPRL
QLPLSLSYDH RVIDGAEGAR FITYLNECLS DIRRLVL
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