| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1988 |
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| Symbol | lpdA |
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| ID | 5136365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2134524 |
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| End bp | 2135951 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533445 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001217912 |
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| Protein GI | 147674273 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG AAATTAAAGC CCAAGTCGTG GTGCTTGGTG CCGGTCCTGC TGGTTACTCC
GCCGCATTCC GCTGTGCAGA CTTAGGTCTG GATACCGTCA TCATCGAACG TTACAACACG
CTAGGTGGTG TGTGTTTGAA CGTTGGTTGT ATTCCTTCTA AAGCACTGCT GCACGTGGCA
AAAGTGATTG AAGAAGCCAA AGCGCTGACT GAGCACGGTA TCGTGTTTGG CGAGCCAAAG
ACAGACATCG ACAAAGTTCG TCTGTGGAAA GAAAAAGTGA TCAATCAGCT GACCGGTGGT
CTGGCTGGTA TGGCAAAAAT GCGTAAAGTG AACGTAGTGA ACGGCTACGG TAAATTCACC
GGCCCGAACA CTATTGAAGT GGAAGGCGAA GAGGGCAAAA CTGTCGTAAC TTTCGATAAC
GCGATCGTTG CTGCAGGTTC TCGTCCAATC AAACTGCCAT TCATTCCGCA TGAAGACCCA
CGTATTTGGG ATTCAACTGA TGCGCTGGAA CTGAAAGAAG TGCCTGGAAA ACTGCTGATC
ATGGGCGGCG GTATCATCGG CCTGGAAATG GCGACCGTTT ACCATTCACT GGGTTCTAAA
ATTGATGTAG TTGAGATGTT TGACCAACTT ATCCCTGCTG CGGATAAAGA CATGGTTAAA
GTCTATACCA AACGCATCAA AGATAAGTTC AACCTGATGC TGGAAACCAA AGTTACCGCC
GTTGAAGCGA AAGAAGATGG TATCTACGTT TCAATGGAAG GTAAGAGCGC ACCAGCACAA
GCTGAGCGTT ACGATGCGGT TCTGGTTGCA ATTGGCCGTG TACCAAACGG TAAACTACTG
GATGCTGAGA AAGCGGGTCT GGAAGTGGAC GAGCGTGGCT TTATCCGCGT GGATAAGCAA
ATGCGCACTA ACGTTCCGCA CATCTTCGCG ATCGGTGACA TCGTGGGTCA ACCAATGCTA
GCACATAAAG GCGTGCATGA AGGCCACGTA GCGGCAGAAG TGATCTCTGG TAAGAAGCAC
TACTTCGATC CAAAAGTGAT CCCATCCATC GCTTACACTG AGCCAGAAGT GGCTTGGGTT
GGTAAGACAG AAAAAGAAGC AAAAGCAGAA GGCATCAACT ATGAAGTTGC TACTTTCCCA
TGGGCAGCCT CTGGCCGTGC GATTGCTTCT GACTGTGCAG ACGGTATGAC TAAGCTTATC
TTCGATAAAG AGACTCATCG TGTGATCGGT GGTGCTATCG TAGGTACTAA CGGTGGTGAA
CTGTTGGGTG AAATCGGTCT GGCGATAGAG ATGGGCTGTG ATGCAGAAGA CATCGCACTG
ACCATTCATG CTCACCCAAC GCTGCATGAG TCTGTGGGTC TGGCCGCTGA AGTCTTCGAA
GGCACCATCA CTGACCTGCC AAACGCCAAA GCGAAAAAGA AAAAATAA
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| Protein sequence | MSKEIKAQVV VLGAGPAGYS AAFRCADLGL DTVIIERYNT LGGVCLNVGC IPSKALLHVA
KVIEEAKALT EHGIVFGEPK TDIDKVRLWK EKVINQLTGG LAGMAKMRKV NVVNGYGKFT
GPNTIEVEGE EGKTVVTFDN AIVAAGSRPI KLPFIPHEDP RIWDSTDALE LKEVPGKLLI
MGGGIIGLEM ATVYHSLGSK IDVVEMFDQL IPAADKDMVK VYTKRIKDKF NLMLETKVTA
VEAKEDGIYV SMEGKSAPAQ AERYDAVLVA IGRVPNGKLL DAEKAGLEVD ERGFIRVDKQ
MRTNVPHIFA IGDIVGQPML AHKGVHEGHV AAEVISGKKH YFDPKVIPSI AYTEPEVAWV
GKTEKEAKAE GINYEVATFP WAASGRAIAS DCADGMTKLI FDKETHRVIG GAIVGTNGGE
LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SVGLAAEVFE GTITDLPNAK AKKKK
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